Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060083.seq
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118970-1|AAM50830.1|  264|Drosophila melanogaster LD47455p pro...   140   2e-33
AE014296-2197|AAF49876.1|  264|Drosophila melanogaster CG10754-P...   140   2e-33
BT024237-1|ABC86299.1|  751|Drosophila melanogaster LD02865p pro...    35   0.12 
AY051809-1|AAK93233.1|  350|Drosophila melanogaster LD32068p pro...    35   0.12 
AE014296-240|AAF47485.1|  724|Drosophila melanogaster CG2199-PA,...    35   0.12 
AE014296-239|AAN11474.1|  733|Drosophila melanogaster CG2199-PB,...    35   0.12 
U73125-1|AAB40721.1|  558|Drosophila melanogaster zinc-finger pr...    31   1.4  
AY058357-1|AAL13586.1|  635|Drosophila melanogaster GH12756p pro...    31   1.4  
AE014296-2637|AAF49537.2|  635|Drosophila melanogaster CG5215-PA...    31   1.4  
AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB...    31   1.4  
AY061480-1|AAL29028.1|  194|Drosophila melanogaster LD44732p pro...    29   5.8  
AE014296-810|AAF47873.1|  194|Drosophila melanogaster CG11586-PA...    29   5.8  
BT001375-1|AAN71130.1|  340|Drosophila melanogaster GH01139p pro...    29   7.7  
AE014296-94|AAF47381.1|  345|Drosophila melanogaster CG1231-PA p...    29   7.7  

>AY118970-1|AAM50830.1|  264|Drosophila melanogaster LD47455p
           protein.
          Length = 264

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/139 (51%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
 Frame = +3

Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ-XXXXXXXXXXXXXXXXXXXPEKPR 431
           YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ                    PEKPR
Sbjct: 45  YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPR 104

Query: 432 IEPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQT 611
           +EPKKFVKIGRPGYRVTKQ +   G ++   +     +   +           +++    
Sbjct: 105 VEPKKFVKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPD 164

Query: 612 ADGQYXLFAAEPYETIALK 668
              QY LFAAEPYETI  K
Sbjct: 165 RKWQYLLFAAEPYETIGFK 183



 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = +1

Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
           MDFQNR GGKTG GGVASWSE+NRDR+ERLRQLALETIDLNKDP
Sbjct: 1   MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDP 44



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 38/60 (63%), Positives = 42/60 (70%)
 Frame = +2

Query: 500 NWTQSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
           N  QSLLFQVDYPEI E ++PRHRFMSAY QKIEPPDR+W      +       FKVPSR
Sbjct: 128 NGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSR 187


>AE014296-2197|AAF49876.1|  264|Drosophila melanogaster CG10754-PA
           protein.
          Length = 264

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/139 (51%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
 Frame = +3

Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ-XXXXXXXXXXXXXXXXXXXPEKPR 431
           YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ                    PEKPR
Sbjct: 45  YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPR 104

Query: 432 IEPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQT 611
           +EPKKFVKIGRPGYRVTKQ +   G ++   +     +   +           +++    
Sbjct: 105 VEPKKFVKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPD 164

Query: 612 ADGQYXLFAAEPYETIALK 668
              QY LFAAEPYETI  K
Sbjct: 165 RKWQYLLFAAEPYETIGFK 183



 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = +1

Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
           MDFQNR GGKTG GGVASWSE+NRDR+ERLRQLALETIDLNKDP
Sbjct: 1   MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDP 44



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 38/60 (63%), Positives = 42/60 (70%)
 Frame = +2

Query: 500 NWTQSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
           N  QSLLFQVDYPEI E ++PRHRFMSAY QKIEPPDR+W      +       FKVPSR
Sbjct: 128 NGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSR 187


>BT024237-1|ABC86299.1|  751|Drosophila melanogaster LD02865p
           protein.
          Length = 751

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 201 AGEITTACTRNNRF---KQR--SYFMKNHLGSYECKLCLTLHNNEGSYLAH 338
           A E T +C R  +F   +QR  S+  K H    +C LC  ++ N+  Y+AH
Sbjct: 666 ADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 716


>AY051809-1|AAK93233.1|  350|Drosophila melanogaster LD32068p
           protein.
          Length = 350

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 201 AGEITTACTRNNRF---KQR--SYFMKNHLGSYECKLCLTLHNNEGSYLAH 338
           A E T +C R  +F   +QR  S+  K H    +C LC  ++ N+  Y+AH
Sbjct: 265 ADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 315


>AE014296-240|AAF47485.1|  724|Drosophila melanogaster CG2199-PA,
           isoform A protein.
          Length = 724

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 201 AGEITTACTRNNRF---KQR--SYFMKNHLGSYECKLCLTLHNNEGSYLAH 338
           A E T +C R  +F   +QR  S+  K H    +C LC  ++ N+  Y+AH
Sbjct: 639 ADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 689


>AE014296-239|AAN11474.1|  733|Drosophila melanogaster CG2199-PB,
           isoform B protein.
          Length = 733

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 201 AGEITTACTRNNRF---KQR--SYFMKNHLGSYECKLCLTLHNNEGSYLAH 338
           A E T +C R  +F   +QR  S+  K H    +C LC  ++ N+  Y+AH
Sbjct: 648 ADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 698


>U73125-1|AAB40721.1|  558|Drosophila melanogaster zinc-finger
           protein Zn72D protein.
          Length = 558

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 170 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 201


>AY058357-1|AAL13586.1|  635|Drosophila melanogaster GH12756p
           protein.
          Length = 635

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>AE014296-2637|AAF49537.2|  635|Drosophila melanogaster CG5215-PA,
           isoform A protein.
          Length = 635

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB,
           isoform B protein.
          Length = 884

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>AY061480-1|AAL29028.1|  194|Drosophila melanogaster LD44732p
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 276 GSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           G Y C +C  +  +  ++L H  GKKHQ
Sbjct: 71  GGYYCNVCDCVVKDSINFLDHINGKKHQ 98


>AE014296-810|AAF47873.1|  194|Drosophila melanogaster CG11586-PA
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 276 GSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
           G Y C +C  +  +  ++L H  GKKHQ
Sbjct: 71  GGYYCNVCDCVVKDSINFLDHINGKKHQ 98


>BT001375-1|AAN71130.1|  340|Drosophila melanogaster GH01139p
           protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 273 LGSYECKLCLTLHNNEGSYLAHTQGKKH 356
           +G Y C+ C  + N+E +   H  GKKH
Sbjct: 299 MGQYYCQPCNMMMNHESTLQQHFIGKKH 326


>AE014296-94|AAF47381.1|  345|Drosophila melanogaster CG1231-PA
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 273 LGSYECKLCLTLHNNEGSYLAHTQGKKH 356
           +G Y C+ C  + N+E +   H  GKKH
Sbjct: 304 MGQYYCQPCNMMMNHESTLQQHFIGKKH 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,554,348
Number of Sequences: 53049
Number of extensions: 461021
Number of successful extensions: 1332
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)