Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060083.seq
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.7  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 503 WTQSLLFQVDYPEIAEGVIPRHRF 574
           WT++++F V    +AE ++ R R+
Sbjct: 23  WTKNMVFVVGLERVAEELMGRRRW 46


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 175 SWSESNRDRRERLR 216
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 175 SWSESNRDRRERLR 216
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 175 SWSESNRDRRERLR 216
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 175 SWSESNRDRRERLR 216
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 270 HLGSYECKLCLTLHNNEGSY 329
           H+  Y   + + LHN EG++
Sbjct: 274 HVPEYSSSIIMELHNIEGTH 293


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 270 HLGSYECKLCLTLHNNEGSY 329
           H+  Y   + + LHN EG++
Sbjct: 289 HVPEYSSSIIMELHNIEGTH 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,621
Number of Sequences: 438
Number of extensions: 3529
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)