Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060082.seq
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             28   0.31 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.54 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   3.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   5.0  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    24   5.0  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 261  HLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGL 437
            H  +V++  + +D  +AEY  PQY+   F +T  R    G  R + +F++  ++P +G+
Sbjct: 1079 HERSVRYQCYVVD-PIAEYNMPQYKLREFKVTDAR---DGSSRTVRQFQF-ITWPEQGV 1132


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 103 KINNYQRLNIIFNSKFKMDVCKENECLTLQDKNIMSKKYYRRVE 234
           K + Y R  +IF  K K +  K    + L +++I  +  YRR+E
Sbjct: 27  KTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYRRIE 70


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 441 FDTLYGNLLKVDAYGNILVC 500
           F  LY ++  +  +GN+LVC
Sbjct: 98  FCVLYSSIFVLGVFGNVLVC 117


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 11   PRIVKILFHKFASGTVLNKNSA 76
            P I+  L+HKFA  T L  NSA
Sbjct: 2391 PAIIGALYHKFA--TALGHNSA 2410


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 11   PRIVKILFHKFASGTVLNKNSA 76
            P I+  L+HKFA  T L  NSA
Sbjct: 2392 PAIIGALYHKFA--TALGHNSA 2411


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 270 FLNATTVNENSVFNTTIVFLGHNIF--ILKSQALVFLTNIHFKFRIKNYVK 124
           FL   TVN   V+NT  V L   IF  + +   ++ L+ +  +FRI    K
Sbjct: 543 FLGVATVNNKHVWNTWFVLL-TIIFCSVYRILGVLILSALANRFRIHKLTK 592


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 331 YCGDLYSANV*SISKP*NLTFSKCNDC*RKF 239
           YCG  Y  N   +S     T + C DC RKF
Sbjct: 39  YCGYGY-LNRKGVSCDGQTTINSCEDCKRKF 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,843
Number of Sequences: 2352
Number of extensions: 16165
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)