Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060081.seq
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical ... 103 7e-23
AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical ... 79 3e-15
Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 29 3.1
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 29 3.1
AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine re... 29 3.1
Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein. 28 4.1
AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinas... 28 4.1
AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical ... 28 5.5
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 7.2
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 27 7.2
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 27 7.2
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 27 9.5
AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical
protein Y71H10A.1a protein.
Length = 814
Score = 103 bits (248), Expect = 7e-23
Identities = 46/73 (63%), Positives = 58/73 (79%)
Frame = +1
Query: 40 LTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSA 219
LTGAN FR EW+ L+ EL++N ++T +K ++ I G+VGSIDNDFCGTDMTIGTDSA
Sbjct: 152 LTGANTFRLEWTDLVQELVKNQRVTAAAAKKIPYIQIVGLVGSIDNDFCGTDMTIGTDSA 211
Query: 220 LHRIIEAIDAIVA 258
L RII +IDA+VA
Sbjct: 212 LQRIISSIDAVVA 224
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = +3
Query: 255 STAYSHQRTFIMEVMGRNCGYXALVAALASEAYQVFIPEDPVPNNWVXKXXXXXXXXXXX 434
+TA SHQR F++EVMGR+CGY ALVAALASEA FIPE P P NW
Sbjct: 224 ATAQSHQRAFVIEVMGRHCGYLALVAALASEADFCFIPEWPAPENWRDVLCDKLSQMRSE 283
Query: 435 XXXXNXIIXAEGAI 476
N II AEGAI
Sbjct: 284 GQRLNIIIVAEGAI 297
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 255 STAYSHQRTFIMEVMGRNCGYXALVAALASEAYQVFIPEDP 377
S + +R FI+E MG CGY A ++AL+S A +I E+P
Sbjct: 594 SATGTKRRVFIVETMGGYCGYLATLSALSSGADNAYIFEEP 634
>AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical
protein Y71H10A.1b protein.
Length = 578
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = +3
Query: 255 STAYSHQRTFIMEVMGRNCGYXALVAALASEAYQVFIPEDPVPNNWVXKXXXXXXXXXXX 434
+TA SHQR F++EVMGR+CGY ALVAALASEA FIPE P P NW
Sbjct: 21 ATAQSHQRAFVIEVMGRHCGYLALVAALASEADFCFIPEWPAPENWRDVLCDKLSQMRSE 80
Query: 435 XXXXNXIIXAEGAI 476
N II AEGAI
Sbjct: 81 GQRLNIIIVAEGAI 94
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 255 STAYSHQRTFIMEVMGRNCGYXALVAALASEAYQVFIPEDP 377
S + +R FI+E MG CGY A ++AL+S A +I E+P
Sbjct: 391 SATGTKRRVFIVETMGGYCGYLATLSALSSGADNAYIFEEP 431
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 196 MTIGTDSALHRIIEAIDAIVA 258
MTIGTDSAL RII +IDA+VA
Sbjct: 1 MTIGTDSALQRIISSIDAVVA 21
>Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical
protein C50F4.2 protein.
Length = 756
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +1
Query: 40 LTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSA 219
L GA ++EW +EL KIT++ + + LH+AG+VGSIDND +D +IG+D+A
Sbjct: 115 LMGAQKLKEEWGRFGEELFAEGKITEEVANEGRELHLAGIVGSIDNDCIESDKSIGSDTA 174
Query: 220 LHRIIEAIDAIV 255
LHRI EAID +V
Sbjct: 175 LHRICEAIDGLV 186
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/71 (46%), Positives = 38/71 (53%)
Frame = +3
Query: 258 TAYSHQRTFIMEVMGRNCGYXALVAALASEAYQVFIPEDPVPNNWVXKXXXXXXXXXXXX 437
TA SHQR F++EVMGR+CGY AL AA+A EA VF PE P W +
Sbjct: 188 TAQSHQRVFVVEVMGRHCGYLALTAAIAVEADYVFYPEIPPDEKWPEQLCHQLGSVRKMG 247
Query: 438 XXXNXIIXAEG 470
N II EG
Sbjct: 248 KRQNVIILGEG 258
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/109 (21%), Positives = 44/109 (40%)
Frame = +1
Query: 7 WIPRAAGIRHELTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFC 186
WI + + +G + +RQ LL + K R+KYK + ++ + +
Sbjct: 909 WIQKLCQLASLSSGCSAYRQCKKLLLAMCHNDENKYKIMRDKYK---MQDLLQQLVKKYL 965
Query: 187 GTDMTIGTDSALHRIIEAIDAIVALLIHIKEHLLWRSWVATVVXWPLSL 333
+G L I++ + +I L + + +WR +T W L L
Sbjct: 966 DVSKEVGGHQQLTEIVDVLASITKLALIRPD--MWRDVCSTHTTWLLRL 1012
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/109 (21%), Positives = 44/109 (40%)
Frame = +1
Query: 7 WIPRAAGIRHELTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFC 186
WI + + +G + +RQ LL + K R+KYK + ++ + +
Sbjct: 909 WIQKLCQLASLSSGCSAYRQCKKLLLAMCHNDENKYKIMRDKYK---MQDLLQQLVKKYL 965
Query: 187 GTDMTIGTDSALHRIIEAIDAIVALLIHIKEHLLWRSWVATVVXWPLSL 333
+G L I++ + +I L + + +WR +T W L L
Sbjct: 966 DVSKEVGGHQQLTEIVDVLASITKLALIRPD--MWRDVCSTHTTWLLRL 1012
>AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 66 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -1
Query: 521 HIXXHSAVIGLHXRSDXT----LGXNDXIQTLTRTPXLLQSXAKFXNPIIGN 378
H H+ + LH D T G D Q++ L+ + A F +PIIGN
Sbjct: 154 HEEIHNETLHLHPEYDYTPYLDFGGFDAFQSIYLGRALMMAIATFYSPIIGN 205
>Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical
protein F52F12.3 protein.
Length = 536
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 403 FAXDCNRXGVLVNV*IXSLXPRVXSDRXCNPITAEWXXMWWFDN 534
+ D + G+L NV +L P+ + CNPI +E+ W DN
Sbjct: 249 YRRDLSVPGLLYNVATANLRPQ---ELECNPILSEFYKKCWNDN 289
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 145 HIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVALLIHIKEHLLW 291
H AG+V +ND C T + + + D ++A +IH H+++
Sbjct: 138 HHAGLVSMYENDLCVVFRTYRSGVFFFSMADQGDVLIAQIIHGTVHVIF 186
>AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein.
Length = 536
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 403 FAXDCNRXGVLVNV*IXSLXPRVXSDRXCNPITAEWXXMWWFDN 534
+ D + G+L NV +L P+ + CNPI +E+ W DN
Sbjct: 249 YRRDLSVPGLLYNVATANLRPQ---ELECNPILSEFYKKCWNDN 289
>AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinase
MOM-4 protein.
Length = 536
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 403 FAXDCNRXGVLVNV*IXSLXPRVXSDRXCNPITAEWXXMWWFDN 534
+ D + G+L NV +L P+ + CNPI +E+ W DN
Sbjct: 249 YRRDLSVPGLLYNVATANLRPQ---ELECNPILSEFYKKCWNDN 289
>AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical
protein M03F8.1 protein.
Length = 344
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -3
Query: 138 FIFFPLIFSNFVVLQQFIKKARPFLSEQIGT 46
F+F P++ ++F++ + + + + F S IGT
Sbjct: 161 FVFLPMVLNSFILAKTLVIENKTFTSLMIGT 191
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 82 LDELLENNKITKDQREKYKFLH 147
L+++LEN KI D+ KY LH
Sbjct: 814 LEDILENEKIELDKLMKYSLLH 835
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 82 LDELLENNKITKDQREKYKFLH 147
L+++LEN KI D+ KY LH
Sbjct: 187 LEDILENEKIELDKLMKYSLLH 208
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 82 LDELLENNKITKDQREKYKFLH 147
L+++LEN KI D+ KY LH
Sbjct: 755 LEDILENEKIELDKLMKYSLLH 776
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 82 LDELLENNKITKDQREKYKFLH 147
L+++LEN KI D+ KY LH
Sbjct: 814 LEDILENEKIELDKLMKYSLLH 835
>Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical
protein T02G6.6 protein.
Length = 397
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 220 RLNQYLLSCLYHKNHCQLNQPFQLCAKIYIFPF 122
+L+QY + +YH+ QL Q C KI + F
Sbjct: 247 QLSQYKIDNVYHRKQIQLPVLTQSCVKISLMNF 279
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 QEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDF---CGTDMTIGTDS---ALH 225
QEW L D + + ++ Q+E K +I G ++ + C ++ + ALH
Sbjct: 282 QEWEPLPDPVEDPVEMAAIQKEACK--NILGKESCVEKEIIENCNVELAVNFRKHFLALH 339
Query: 226 RIIEAIDAIV 255
RII A D +V
Sbjct: 340 RIIGAYDPVV 349
>AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical
protein W09B7.3 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 QEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDF---CGTDMTIGTDS---ALH 225
QEW L D + + ++ Q+E K +I G ++ + C ++ + ALH
Sbjct: 159 QEWEPLPDPVEDPVEMAAIQKEACK--NILGKESCVEKEIIENCNVELAVNFRKHFLALH 216
Query: 226 RIIEAIDAIV 255
RII A D +V
Sbjct: 217 RIIGAYDPVV 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,519
Number of Sequences: 27780
Number of extensions: 247596
Number of successful extensions: 565
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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