Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060079.seq
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 169 4e-41
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 61 3e-08
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 49 9e-05
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 47 4e-04
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 44 0.005
UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass etched... 43 0.006
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 42 0.014
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 40 0.057
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 40 0.076
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 38 0.18
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 38 0.18
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 38 0.18
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 38 0.31
UniRef50_Q0U4Z9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 38 0.31
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 37 0.40
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 37 0.53
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 37 0.53
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 36 0.71
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 36 0.71
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 36 0.93
UniRef50_Q9VED3 Cluster: CG7847-PA, isoform A; n=5; Drosophila|R... 35 1.6
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 35 1.6
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R... 35 2.2
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 34 2.9
UniRef50_Q1IU56 Cluster: Putative uncharacterized protein precur... 34 2.9
UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase... 34 2.9
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 34 2.9
UniRef50_A2FBZ3 Cluster: GP63-like; n=6; Trichomonas vaginalis G... 34 2.9
UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;... 34 3.8
UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,... 34 3.8
UniRef50_A3BN50 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_Q4S4K5 Cluster: Chromosome 2 SCAF14738, whole genome sh... 33 5.0
UniRef50_A5NQH0 Cluster: Putative uncharacterized protein precur... 33 5.0
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 33 5.0
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 33 6.6
UniRef50_UPI000023D465 Cluster: hypothetical protein FG10402.1; ... 33 6.6
UniRef50_Q1HTT9 Cluster: A5L; n=1; Squirrelpox virus|Rep: A5L - ... 33 6.6
UniRef50_O14776 Cluster: Transcription elongation regulator 1; n... 33 6.6
UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding prote... 33 6.6
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 33 8.7
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 33 8.7
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 169 bits (412), Expect = 4e-41
Identities = 82/93 (88%), Positives = 85/93 (91%)
Frame = +2
Query: 254 SDVTVEGVNVLATPSSARITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYFH 433
+DVTVEG NVLATPSSARIT+GGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNI+FH
Sbjct: 143 ADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFH 202
Query: 434 QSPDAVLEGVRAGVKASVVIRGSISYLTPSSLG 532
QS DAVLEGVRAGVKASVVIRGSIS P G
Sbjct: 203 QSADAVLEGVRAGVKASVVIRGSISVSHPLVTG 235
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 SDVTVEGVNVLATPSSARITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYF 430
S V++ G +L+T R+T GG + + LP DL NP++K + Y N P+L + F
Sbjct: 137 SSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVKDTVSYNNTPKLTVAF 196
Query: 431 HQSPDAVLEGVRAGV-KASVVIRGSI 505
H++ DA V V S+VIRG +
Sbjct: 197 HKNTDAPAVSVTTPVIYGSIVIRGVV 222
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/87 (32%), Positives = 42/87 (48%)
Frame = +2
Query: 260 VTVEGVNVLATPSSARITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYFHQS 439
VT +L+ + RI G + LP +L +NP IK + YT+ PRL F+++
Sbjct: 136 VTPARSEILSVFGAQRIAWGSVHFSAPILLPAELSSLNPTIKDSVTYTDCPRLTCGFYRN 195
Query: 440 PDAVLEGVRAGVKASVVIRGSISYLTP 520
V G A + S++IRG I P
Sbjct: 196 DACVALGSSAPICGSILIRGVIECSAP 222
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +2
Query: 254 SDVTVEGVNVLATPSSARITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYFH 433
++V + +L R IGG L H L DL Y+NP+IK + Y + P+L +
Sbjct: 1885 NNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKLTL--- 1941
Query: 434 QSPDAVLEGVRAGVKASVVIRGSI 505
+ D G A A+V++ G +
Sbjct: 1942 NASDPTGSGSTATTVATVLVSGKL 1965
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 311 TIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNIYFHQSPDAVLEGVRAGVKASV 487
T+GG LM T LP DL +NP++K P+ YT+ PR + + + G + ++
Sbjct: 2118 TVGGPVLMSSTTHLPADLTRLNPVLKGPVKYTDCPRFSYSVYSN-----GGTKGTNLCTI 2172
Query: 488 VIRGSISYLTPS 523
++RG + PS
Sbjct: 2173 ILRGVVRLSGPS 2184
>UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass
etched-line virus|Rep: Coat protein - Bermuda grass
etched-line virus
Length = 195
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 305 RITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNIYFHQSPDAVLEGVRAGVK- 478
+IT+GG ++ T +P DL +NP+IKS + Y + PR ++ P ++ G A K
Sbjct: 121 QITVGGPVMLSSTTVIPADLSRMNPVIKSSVSYNDCPRWSL---TCP--LVSGSSANTKL 175
Query: 479 ASVVIRGSISYLTPS 523
A++ IRG++ +PS
Sbjct: 176 ATLYIRGTVRLSSPS 190
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI*NTSHS*PLLDYSDV 262
++++K WVPVTKLGRL + GKI +E I +S P+ +Y V
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEI--YLYSLPIKEYQIV 68
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 39.9 bits (89), Expect = 0.057
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 140 DQKXWVPVTKLGRLXREGKIDKLESI*NTSHS*PLLDY 253
++K WVPVTKLGRL + GKI +E I HS P+ ++
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEI--FLHSLPVKEF 66
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 39.5 bits (88), Expect = 0.076
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 305 RITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNIYFHQSPDAVLEGVRAGVKA 481
+IT+GG ++ T +P DL +NP IKS + Y + PR + S AV G A
Sbjct: 1951 QITVGGPVMLSSTTAVPADLARMNPFIKSSVSYNDTPR----WTMSVPAVTGGDTKIPLA 2006
Query: 482 SVVIRGSISYLTPS 523
+ +RG + PS
Sbjct: 2007 TAFVRGIVRVRAPS 2020
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEI 81
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEI 56
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 137 EDQKXWVPVTKLGRLXREGKIDKLESI 217
+D+ WVP TKLGRL ++GKI LE I
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHI 71
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>UniRef50_Q0U4Z9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1057
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 336 IKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAIS 515
+K+PSPA +++R PR P ++ +++ KE +P P + PS+I+
Sbjct: 248 VKMPSPADFHSTSRPMGPRDMAPPPLNMPTLNTQYAASLPKEPSPTYSPARNISNPSSIN 307
Query: 516 PPR 524
PPR
Sbjct: 308 PPR 310
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 143 QKXWVPVTKLGRLXREGKIDKLESI*NTSHS*PLLDYSDV 262
++ WVP+TKLGRL + GKI LE+I S P+ +Y V
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETI--FQFSIPIKEYQIV 98
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 36.7 bits (81), Expect = 0.53
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 281 VLATPSSARITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNIYFHQSPDAVLE 457
+L+ R IGG Q +PC+L +N +IK YT+ P+L +Y SP V +
Sbjct: 108 ILSVYGGQRFLIGGTLTTSQVIRVPCNLQSVNAMIKDSTIYTDSPKLLVY---SP--VAK 162
Query: 458 GVRAGVKASVVIRGSISYLTP 520
G A+V I G I P
Sbjct: 163 GSPKTPSATVQIAGQILLSAP 183
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 36.7 bits (81), Expect = 0.53
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 VLATPSSARITIGGLALMHQA-TLPCDLGYINPIIKSPIPYTNHPRLNIYFHQSPDAVLE 457
+L T R T+GG +Q + P L +NPIIK + Y + PRL + P+
Sbjct: 108 ILQTYGGNRFTVGGPITSNQIISFPLRLDSVNPIIKDSVLYLDSPRLLAFSPAPPE---- 163
Query: 458 GVRAGVKASVVIRGSI 505
++ AS++IRG +
Sbjct: 164 -TQSIPSASLLIRGKL 178
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 36.3 bits (80), Expect = 0.71
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 ITIGGLALMHQ-ATLPCDLGYINPIIKSPIPYTNHPRL 418
IT GG M+ AT+P DL INP IKS + Y + PRL
Sbjct: 1997 ITAGGPVSMNALATVPADLTRINPRIKSSVGYLDTPRL 2034
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 36.3 bits (80), Expect = 0.71
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 ITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPR 415
+T+GG LM T +P DL +NP+IK+ + +T+ PR
Sbjct: 1992 LTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFTDCPR 2028
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 347 LPCDLGYINPIIKSPIPYTNHPRLNIY 427
+PC L INPIIK + YT+ P+L IY
Sbjct: 130 VPCPLTNINPIIKDSVTYTDTPKLLIY 156
>UniRef50_Q9VED3 Cluster: CG7847-PA, isoform A; n=5; Drosophila|Rep:
CG7847-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1186
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 336 IKLPSPAISATSTRSSNPR--FHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSA 509
+ L + A +AT++ S+N + +TPTTP L +S NPL +FAP PP++ P+A
Sbjct: 42 LNLVAGAGAATNSTSANSQDSLNTPTTP-LLGLSRNPL-----QFAPPPAPPIAVPNPAA 95
Query: 510 ISP 518
P
Sbjct: 96 SGP 98
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 263 TVEGVNVLATPSSARITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYFHQS 439
T +L T +I++GG + A + +L +NP IK YT+ P+L +Y S
Sbjct: 113 TTTSSQILGTYGGQQISVGGQVTNSSPAKVSANLLMMNPHIKDSTSYTDTPKLLVY---S 169
Query: 440 PDAVLEGVRAGVKASVVIRGSISYLTP 520
AV + AS+++ G + +P
Sbjct: 170 TPAVPDDKLTTSSASIIVFGEVLLSSP 196
>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
OmpA/MotB precursor - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 673
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 360 SATSTRSSNPRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAISPP 521
+A + + P TP PD+T S P TP +P PP + AP+A +PP
Sbjct: 233 AAPAQTTPAPGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPP 288
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+P TKLG L ++ KI LE I
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEI 81
>UniRef50_Q1IU56 Cluster: Putative uncharacterized protein
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Putative uncharacterized protein precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 163
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 364 AEIAGEGSLMHKGETANSNASG*RGGQHID-SFNCDVRVVQQRSTVTGI 221
AE +G S + G + G +G Q++D FNCD R++Q S+ G+
Sbjct: 55 AEASGGSSQIRTGNRIPVDIGGDKGLQYMDVGFNCDARIIQSGSSNVGL 103
>UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase;
n=29; Eukaryota|Rep: Cytosolic glucose-6-phosphate
isomerase - Porphyra yezoensis
Length = 635
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 329 LMHQA-TLPCD-LGYI---NPIIKSPIPYTNHPRLNIYFHQSPDAVLEGVRA 469
L+H T+PCD +G++ NPI + P +NH L F PDA+ G A
Sbjct: 464 LLHMGQTVPCDFIGFMESQNPICEEGEPVSNHDELVANFFAQPDALANGKTA 515
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 152 WVPVTKLGRLXREGKIDKLESI 217
W PVTKLGRL ++GK+ ++ I
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQI 56
>UniRef50_A2FBZ3 Cluster: GP63-like; n=6; Trichomonas vaginalis
G3|Rep: GP63-like - Trichomonas vaginalis G3
Length = 698
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 339 KLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA---PSA 509
K P+P + ++ PR TP TP T + P TP K P + P SE+ P
Sbjct: 559 KTPTPTPRTPTPKTPTPRTPTPKTP--TPKTPTPKTPTPKPLEPMISTPTKSESEYEPYV 616
Query: 510 ISPPRH 527
S P H
Sbjct: 617 TSSPEH 622
>UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 135
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 372 TRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISP 518
T S P++H P PD + NP+TPY + PP+ + AP+ P
Sbjct: 47 THISLPQYHRPPKPDFSLAPDNPVTPY-------VSPPVCTAAPATRHP 88
>UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,
partial; n=1; Macaca mulatta|Rep: PREDICTED:
hypothetical protein, partial - Macaca mulatta
Length = 180
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 351 PAISATSTRS---SNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS--EAPSAIS 515
P ++A S++ S P P + L S+S P+T +F P L PP+SS + PS+ S
Sbjct: 35 PPVTAPSSQFPPVSAPSSQFPRSVPLKSVSAPPVTASSSQFPPSLPPPVSSPGQCPSSQS 94
Query: 516 PP 521
P
Sbjct: 95 VP 96
>UniRef50_A3BN50 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 274
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 407 HPRLNIYFHQS--PDAVLEGVRAGVKASVVIRGSISYLTPSSLGMAKGVSLPYFQVN 571
H RL++ F+ + P AV+ GV+ + V R T S+ G+ GV++P++ V+
Sbjct: 106 HGRLDVVFNNAGIPRAVVAGVKHAARVMVPRRRGSIICTASTAGVIGGVAVPHYSVS 162
>UniRef50_Q4S4K5 Cluster: Chromosome 2 SCAF14738, whole genome shotgun
sequence; n=4; Tetraodontidae|Rep: Chromosome 2
SCAF14738, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2368
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAIS 515
PSP + +S+R S P +H+P+ + + NPLTP A + P S APS +S
Sbjct: 1000 PSPGLCPSSSRQS-PCYHSPS---MRAHPPNPLTPTPSPAAAAPRSPALSPAPSHLS 1052
>UniRef50_A5NQH0 Cluster: Putative uncharacterized protein
precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 462
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 342 LPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISPP 521
L P+ + +R + P PT P+ + I P P E AP PP+ P A +PP
Sbjct: 278 LRRPSSAVAPSRPAAPVMSRPTEPEPVAPVI-PAPPPPPEPAPPPPPPVPEPVPEAAAPP 336
Query: 522 RH 527
H
Sbjct: 337 PH 338
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDL 419
P P + TSTR+SNP HTP P L
Sbjct: 31 PHPPKATTSTRTSNPAAHTPNQPPL 55
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +1
Query: 304 SHYYWRSRPYASSYPPLRSRLHQPDHQIPDSIHQPPQT*HLFPSIP 441
S Y P+ SS+PP HQP HQ P HQPP H P P
Sbjct: 420 SGYPVHQTPHPSSHPP-----HQPPHQSP---HQPPHAPHQPPHQP 457
>UniRef50_UPI000023D465 Cluster: hypothetical protein FG10402.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10402.1 - Gibberella zeae PH-1
Length = 1187
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 319 RSRPYASSYPPLRSRLHQPDHQIP-DSIHQPPQT*HLFPSIP 441
R AS YPP R R H PDHQ P + + PP H P +P
Sbjct: 293 RMHSAASDYPPFR-RPHTPDHQRPYEPRNSPPG--HYTPEVP 331
>UniRef50_Q1HTT9 Cluster: A5L; n=1; Squirrelpox virus|Rep: A5L -
Squirrelpox virus
Length = 659
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 281 VLATPSSARITIG--GLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIYFH 433
+L P++ R+ +G G + CD+GY ++K P+ Y + P ++IY H
Sbjct: 153 LLRMPAARRLGLGNTGARTVIDDMTVCDIGYHAILVKDPVRY-SRPEIDIYLH 204
>UniRef50_O14776 Cluster: Transcription elongation regulator 1;
n=44; Tetrapoda|Rep: Transcription elongation regulator
1 - Homo sapiens (Human)
Length = 1098
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISP 518
P+PA+S TST SS P T TT TS++ TP ++ P +++ S +P
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTP 322
>UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding protein 3;
n=124; Eumetazoa|Rep: Chromodomain-helicase-DNA-binding
protein 3 - Homo sapiens (Human)
Length = 2000
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 342 LPSP-AISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 497
+P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1518 MPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 32.7 bits (71), Expect = 8.7
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -1
Query: 520 GGEIADGASDDNGGFNPGANSF*YGVRGLMEIDVKSGVVGVWNRGFDDRVDVAEIAGEGS 341
GG+ G S GGF G + RG + G G +RG++DR G
Sbjct: 35 GGDDRRGGSSGGGGFRRGGGNSGGNDRGYNDNRGNGGYSGGRDRGYEDR-GYNNGGGNRG 93
Query: 340 LMHKGETANSNASG*RGGQ 284
++G++ S++ G GG+
Sbjct: 94 YNNRGDSNRSDSRGGDGGR 112
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 152 WVPVTKLGRLXREGKIDKLESI 217
W P TKLGRL +EGKI ++ I
Sbjct: 7 WQPKTKLGRLVKEGKITNIDEI 28
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,535,102
Number of Sequences: 1657284
Number of extensions: 11802944
Number of successful extensions: 40826
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 37639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40543
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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