Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060079.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.2  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   6.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   9.1  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   9.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 319 RSRPYASSYPPLRSRLHQPDHQIPDSIHQPPQT*H 423
           + RP  S  PP+ S   Q   Q    +H P  + H
Sbjct: 68  QKRPVTSPAPPVLSSSAQQQQQQQQLLHHPSSSPH 102


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 342 LPSPAISATSTRSSNPRFHTPTTPDLT 422
           LPS AI+  S  SSN RF     P  T
Sbjct: 106 LPSLAITGLSIGSSNSRFLRQFGPQFT 132


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
 Frame = +2

Query: 305 RITIGGLALMHQATLPCDL-GYINPIIKSP---IPYTNHPRLNIYFHQSPDAVLEGVRAG 472
           R     + ++  + +P  + G I PI+  P   IP  +HP         P  V      G
Sbjct: 33  RTGANNIGVLPASKMPVSVFGDILPILTGPDRPIPGRSHPAEPAPGGNGP-FVRPDAPQG 91

Query: 473 VKASVVIRGSIS--YLTPSSLGMAKGVSLP 556
             A+  +  S S  Y++P+S  M K  SLP
Sbjct: 92  RSAAEGVPSSASPVYMSPASSLMTKATSLP 121


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 260 VTVEGVNVLATPS 298
           VT+ GV+VLATP+
Sbjct: 150 VTIPGVDVLATPT 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,439
Number of Sequences: 2352
Number of extensions: 11495
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)