Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060079.seq
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106060-1|AAI06061.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC105985-1|AAI05986.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC103756-1|AAI03757.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC075830-1|AAH75830.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC073966-1|AAH73966.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC071924-1|AAH71924.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC071923-1|AAH71923.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC071922-1|AAH71922.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC071673-1|AAH71673.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC068051-1|AAH68051.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC066321-1|AAH66321.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC032129-1|AAH32129.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC025677-1|AAH25677.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC023541-1|AAH23541.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC021545-1|AAH21545.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC018993-1|AAH18993.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC016951-1|AAH16951.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC016178-1|AAH16178.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC012354-1|AAH12354.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC010165-1|AAH10165.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC008862-1|AAH08862.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC006559-1|AAH06559.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
BC001795-1|AAH01795.1| 293|Homo sapiens ribosomal protein S2 pr... 38 0.045
AB065089-1|BAB93526.1| 203|Homo sapiens ribosomal protein S2 pr... 38 0.045
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 35 0.31
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 33 0.96
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 33 0.96
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 33 0.96
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 33 0.96
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 33 0.96
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 31 2.9
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 31 2.9
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 31 2.9
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 31 2.9
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 31 2.9
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 31 2.9
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 31 2.9
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 30 6.8
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 30 6.8
AK127460-1|BAC86989.1| 164|Homo sapiens protein ( Homo sapiens ... 30 6.8
BC110816-1|AAI10817.1| 642|Homo sapiens DKFZP564J102 protein pr... 30 8.9
>BC106060-1|AAI06061.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC105985-1|AAI05986.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC103756-1|AAI03757.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC075830-1|AAH75830.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC073966-1|AAH73966.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC071924-1|AAH71924.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC071923-1|AAH71923.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC071922-1|AAH71922.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC071673-1|AAH71673.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC068051-1|AAH68051.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC066321-1|AAH66321.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC032129-1|AAH32129.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC025677-1|AAH25677.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC023541-1|AAH23541.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC021545-1|AAH21545.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC018993-1|AAH18993.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC016951-1|AAH16951.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC016178-1|AAH16178.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC012354-1|AAH12354.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC010165-1|AAH10165.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC008862-1|AAH08862.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC006559-1|AAH06559.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>BC001795-1|AAH01795.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>AB065089-1|BAB93526.1| 203|Homo sapiens ribosomal protein S2
protein.
Length = 203
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 134 KEDQKXWVPVTKLGRLXREGKIDKLESI 217
K + K W+PVTKLGRL ++ KI LE I
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEI 81
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.7 bits (76), Expect = 0.31
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISPPR 524
P+PA+S TST SS P T TT TS++ TP ++ P +++ S +P R
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 33.1 bits (72), Expect = 0.96
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 342 LPSP-AISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 497
+P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1518 MPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 33.1 bits (72), Expect = 0.96
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISP 518
P+PA+S TST SS P T TT TS++ TP ++ P +++ S +P
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTP 322
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 33.1 bits (72), Expect = 0.96
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 342 LPSP-AISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 497
+P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 179 MPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 33.1 bits (72), Expect = 0.96
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 342 LPSP-AISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 497
+P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1518 MPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 33.1 bits (72), Expect = 0.96
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAISP 518
P+PA+S TST SS P T TT TS++ TP ++ P +++ S +P
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTP 326
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 18 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 78 HRRSRSRSYSRDYRRRHSHSHSP 100
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/83 (28%), Positives = 30/83 (36%)
Frame = +1
Query: 127 ARQGRPEXVGSCHQTRPSXSRRKNRQTREHLKYQSQLTFVGLL*RHS*RSQCAGHPFIRS 306
+R G G + P+ SR K R K +S+ R S R RS
Sbjct: 6 SRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 65
Query: 307 HYYWRSRPYASSYPPLRSRLHQP 375
H RSR Y+ Y S H P
Sbjct: 66 HRRSRSRSYSRDYRRRHSHSHSP 88
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 6.8
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSA 509
PS A ++TS R+S P TPT TP T I LTP G P + + AP+
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 510 I 512
I
Sbjct: 69 I 69
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 6.8
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 345 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSA 509
PS A ++TS R+S P TPT TP T I LTP G P + + AP+
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 510 I 512
I
Sbjct: 69 I 69
>AK127460-1|BAC86989.1| 164|Homo sapiens protein ( Homo sapiens
cDNA FLJ45552 fis, clone BRTHA2038279. ).
Length = 164
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 374 PIIKSPIPYTNHPRLNIYFHQSPDAVLEGVRAGVKASVVIRGSISYLTPSSLGMAKGV 547
P SP+P+T R +Y S D VL + ++R +YL LG + V
Sbjct: 61 PGTSSPVPFTGIQRSGVYCGASEDRVLGSASIKDDSGCLLRTPAAYLVVHLLGAVEDV 118
>BC110816-1|AAI10817.1| 642|Homo sapiens DKFZP564J102 protein
protein.
Length = 642
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 680 AWFVAMTTSSMKGVSWRRGAEYAWNDD 600
+W + T SS G S RG+ Y+W DD
Sbjct: 115 SWSGSATQSSTTGSSTERGSVYSWRDD 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,093,571
Number of Sequences: 237096
Number of extensions: 1853004
Number of successful extensions: 5234
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5225
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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