Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060077.seq
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 186 6e-46
UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7; Nucleopolyhe... 122 6e-27
UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai NPV... 95 1e-18
UniRef50_Q91BX9 Cluster: 39K Protein; n=4; Nucleopolyhedrovirus|... 93 4e-18
UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata nucleop... 92 1e-17
UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep... 91 2e-17
UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39... 88 2e-16
UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3; Nucleopolyhedro... 85 2e-15
UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep... 84 4e-15
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 83 8e-15
UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear pol... 82 1e-14
UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura NPV... 79 1e-13
UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar MNPV... 71 2e-11
UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 - X... 40 0.044
UniRef50_Q9JPC7 Cluster: Hypothetical membrane protein; n=1; Rub... 38 0.31
UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 37 0.54
UniRef50_A4XAZ2 Cluster: YD repeat protein; n=3; Salinispora|Rep... 36 0.71
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 36 0.94
UniRef50_Q4T887 Cluster: Chromosome undetermined SCAF7865, whole... 36 1.2
UniRef50_UPI000066053B Cluster: PHD finger protein 12 (PHD facto... 35 1.6
UniRef50_Q7REA2 Cluster: Putative uncharacterized protein PY0516... 35 1.6
UniRef50_Q24GN9 Cluster: Cyclic nucleotide-binding domain contai... 35 1.6
UniRef50_A0E7M0 Cluster: Chromosome undetermined scaffold_81, wh... 35 2.2
UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_UPI0001509CE2 Cluster: Calpain family cysteine protease... 34 3.8
UniRef50_Q9DVY7 Cluster: PxORF45 peptide; n=1; Plutella xylostel... 34 3.8
UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q8KUD0 Cluster: EF0012; n=1; Enterococcus faecalis|Rep:... 33 5.0
UniRef50_A5TTL1 Cluster: Recombination protein J; n=4; Fusobacte... 33 5.0
UniRef50_Q4XZJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q6KIG7 Cluster: Ribonuclease; n=1; Mycoplasma mobile|Re... 33 6.6
UniRef50_Q8IIV9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q4Y1A1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A5E3K0 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_Q890W4 Cluster: Rubredoxin; n=1; Clostridium tetani|Rep... 33 8.8
UniRef50_Q2S0A6 Cluster: TrkH potassium uptake protein; n=1; Sal... 33 8.8
UniRef50_O97242 Cluster: Putative uncharacterized protein MAL3P2... 33 8.8
UniRef50_Q7N2H1 Cluster: Succinylglutamate desuccinylase; n=1; P... 33 8.8
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 186 bits (452), Expect = 6e-46
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +2
Query: 248 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 427
FLE+KNINYILNV+PVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL
Sbjct: 44 FLERKNINYILNVVPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 103
Query: 428 VKNTPELADFVFIFDHTEKMGKKMADR 508
VKN PELADFVFIFDHTEK+GKKMADR
Sbjct: 104 VKNKPELADFVFIFDHTEKLGKKMADR 130
Score = 102 bits (244), Expect = 1e-20
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +1
Query: 481 KDG*KNGRPTTSSSSSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNE 660
K G K +TSSSSS+NAAIPASKKRQT VLTNANLAELKESCEMRDKLYSEFYSLLNE
Sbjct: 122 KLGKKMADRSTSSSSSENAAIPASKKRQTVVLTNANLAELKESCEMRDKLYSEFYSLLNE 181
Query: 661 T 663
T
Sbjct: 182 T 182
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +3
Query: 117 MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLKKRTL 269
MVN+PEQQS ETAAVCKNEKLLNKLESSSYNKSNMDQL IVNFL+++ +
Sbjct: 1 MVNVPEQQSP-ETAAVCKNEKLLNKLESSSYNKSNMDQLAVIVNFLERKNI 50
>UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 261
Score = 122 bits (295), Expect = 6e-27
Identities = 57/114 (50%), Positives = 76/114 (66%)
Frame = +2
Query: 248 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 427
F EKK++NY + +P DERK SKR K+V N+N YILFNS+YTKI++PEWP+SP MWD
Sbjct: 43 FFEKKSVNYTVVALPCSGDERKASKRPKRVNNHNMYILFNSFYTKIRRPEWPNSPTMWDT 102
Query: 428 VKNTPELADFVFIFDHTEKMGKKMADRRHRRLQATTQQFQRAKKDRLRCLPTQI 589
VK EL+DFV +FDHT+K+GK + R A++ F R R + T +
Sbjct: 103 VKAHKELSDFVRVFDHTQKLGKSITSR-----SASSSSFTETNGKRRRSVITNV 151
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = +1
Query: 493 KNGRPTTSSSSSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNET 663
K G+ TS S+S ++ + KR+ +V+TN +AE++E+C+ RDKLYSEFYSLLNET
Sbjct: 121 KLGKSITSRSASSSSFTETNGKRRRSVITN--VAEVQENCDQRDKLYSEFYSLLNET 175
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/83 (27%), Positives = 45/83 (54%)
Frame = +3
Query: 117 MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLKKRTLTISST*CLS 296
MVN+P+ E + N L+++LE+S++NKSN + L +NF +K+++ + L
Sbjct: 1 MVNLPDNVH--EESFANNNASLISRLENSAFNKSNFEYLKTCINFFEKKSVNYTVV-ALP 57
Query: 297 CRTNAKCPNARRR*LTTINTFCL 365
C + + + R + + N + L
Sbjct: 58 CSGDERKASKRPKRVNNHNMYIL 80
>UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai
NPV|Rep: 39K protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 261
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +2
Query: 254 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 433
EKK + Y+L P+ D++K +KR KK I+NNKYILFNSWY KIK+ +PSS MW+L+K
Sbjct: 34 EKKKVPYVLLTSPLYTDDKKSAKRAKKPISNNKYILFNSWYHKIKEDHYPSSSQMWNLMK 93
Query: 434 NTPELADFVFIFDHTEKMGK 493
N + +FV +FD EK+GK
Sbjct: 94 N--KSTEFVNLFDFVEKVGK 111
>UniRef50_Q91BX9 Cluster: 39K Protein; n=4;
Nucleopolyhedrovirus|Rep: 39K Protein - Helicoverpa
armigera NPV
Length = 312
Score = 93.5 bits (222), Expect = 4e-18
Identities = 41/88 (46%), Positives = 64/88 (72%)
Frame = +2
Query: 254 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 433
EK+ I Y ++VMP + D++K+SK+ KK+ +NNKYILFN++ +KIKQ WPSS +W+LVK
Sbjct: 34 EKQKIGYQVHVMPTIADDKKLSKKIKKITSNNKYILFNTFISKIKQSGWPSSSHLWNLVK 93
Query: 434 NTPELADFVFIFDHTEKMGKKMADRRHR 517
+ F+ IFD+ EK+GK + ++ +
Sbjct: 94 VHNQSDAFLHIFDYMEKIGKAIIIKKQQ 121
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +1
Query: 505 PTTSSSSSDNAAIPASKKRQTAVL----TNANLAELKESCEMRDKLYSEFYSLL 654
PTT+ ++++N +K +T+ + ++ NL E+KES E R K+Y+EF ++L
Sbjct: 126 PTTNDTNNNNTTNLLTKSNKTSTVNVKKSDLNLDEIKESNEKRSKVYTEFNNIL 179
Score = 33.1 bits (72), Expect = 6.6
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +3
Query: 174 EKLLNKLESSSYNKSNMDQLIAIVNFLKKRTL 269
E L+ KLE+S YNK++++ L+ ++N +K+ +
Sbjct: 7 ESLIIKLENSVYNKTHIETLVNVINLFEKQKI 38
>UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: 39K/PP31 - Clanis
bilineata nucleopolyhedrosis virus
Length = 281
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +2
Query: 245 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWD 424
K EKK + Y V V ++K K+ KK+INNNKYILFNSWYTKI++ W +S MW+
Sbjct: 33 KLFEKKKVAYRFKVSEVFNMDKKSVKKVKKIINNNKYILFNSWYTKIRKSNWLNSHDMWN 92
Query: 425 LVKNTPELADFVFIFDHTEKMGKK-MADRRHRRLQATTQQFQRAKKDRLRCLPTQIWQN* 601
L+K++ FV IFD EK+ + ++H + T+ + K ++ +I +N
Sbjct: 93 LMKDSLLAKPFVDIFDFMEKLASNTVVSKKHSSVDETSSDGE-IKPKKVEFDSDEIKENN 151
Query: 602 KRAAKCAISFIR 637
+R K F R
Sbjct: 152 ERRVKLYEEFYR 163
>UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep:
39K/pp31 - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 317
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 13/102 (12%)
Frame = +2
Query: 233 NCYCKFLEKKNINYILNVMPVMQD-------------ERKMSKRKKKVINNNKYILFNSW 373
N + LEKK I Y + +MPV D +++ +K+ KK+I+NNKYILFNSW
Sbjct: 33 NTTIQLLEKKKIKYRITMMPVYGDNGLEFTVAIILLHDKRTAKKTKKMISNNKYILFNSW 92
Query: 374 YTKIKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGKKM 499
YTK KQ WP+S MW+++K+ + FV IFD EK+GK +
Sbjct: 93 YTKNKQSVWPNSHMMWNIMKSHSNIKPFVLIFDFMEKLGKSI 134
>UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39K -
Ecotropis obliqua NPV
Length = 293
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +2
Query: 245 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWD 424
K EKK + Y + V + +RK+ KR KK+I NNKYILFNSWYTK ++ W SS MW+
Sbjct: 33 KLFEKKKMTYNITVNEIHNYDRKIVKRGKKMITNNKYILFNSWYTKNRKSHWLSSHDMWN 92
Query: 425 LVKNTPELADFVFIFDHTEKMGK 493
+KN F+ +FD+ EK+ K
Sbjct: 93 YMKNNAACKTFISLFDYIEKLSK 115
>UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3;
Nucleopolyhedrovirus|Rep: ORF120 39K / pp31 - Spodoptera
exigua MNPV
Length = 317
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 13/99 (13%)
Frame = +2
Query: 251 LEKKNINYILNVMP-------------VMQDERKMSKRKKKVINNNKYILFNSWYTKIKQ 391
LEKK I Y + MP V+ ++K +KR KK I+NNKYILFNSWYTK +
Sbjct: 40 LEKKKIKYKIIPMPMCGEDGLEITFAIVIMVDKKNAKRNKKSISNNKYILFNSWYTKNRN 99
Query: 392 PEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGKKMADR 508
P WP+S MW+L+K FV IFD EK+GK + +
Sbjct: 100 PSWPNSHTMWNLIKTQFLAKPFVDIFDFMEKIGKSITTK 138
>UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep:
39k/pp31 - Mamestra configurata NPV-A
Length = 287
Score = 83.8 bits (198), Expect = 4e-15
Identities = 34/70 (48%), Positives = 51/70 (72%)
Frame = +2
Query: 293 VMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVFIFD 472
+ +++K +++ KK+I+ NKYILFNSWYTK +Q WP+S MW+++K+ P FV IFD
Sbjct: 62 IFNNDKKNARKNKKMISYNKYILFNSWYTKNRQETWPNSHTMWNIMKSQPVAKPFVDIFD 121
Query: 473 HTEKMGKKMA 502
EK+GK +A
Sbjct: 122 FMEKLGKTIA 131
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 82.6 bits (195), Expect = 8e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 7 ERKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 120
+RKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYK QTW
Sbjct: 75 KRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQTW 112
>UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: 39K - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 324
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/82 (42%), Positives = 58/82 (70%)
Frame = +2
Query: 254 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 433
EK I Y ++ P+ QD++K +K+ KK+ ++NKYILFN++ +KIKQP WP+S ++W+ K
Sbjct: 33 EKSKIPYHASINPMPQDDKKTNKKPKKITSSNKYILFNTFVSKIKQPGWPNSYSLWNSTK 92
Query: 434 NTPELADFVFIFDHTEKMGKKM 499
P A F+ IF++ E + K++
Sbjct: 93 ADPTNATFLKIFNYIETITKQI 114
>UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura
NPV|Rep: 39k protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 322
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 254 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 433
EK + Y + V + DE+K ++ KK+I++NKYILFN++ +KIKQP WPSS +W+ K
Sbjct: 62 EKMKVPYYIGVTALPCDEKKTHRKPKKIISSNKYILFNTFVSKIKQPGWPSSYRLWNDTK 121
Query: 434 NTPELADFVFIFDHTEKMGKKMADRRHRRLQATTQQFQRAKKD 562
+ F+ +F+H E + KK+ + QQ Q K +
Sbjct: 122 SDSRNDKFLQMFNHVEDLIKKIVITKSVNGDGEPQQNQSKKNN 164
>UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar
MNPV|Rep: Ld-39K/pp31 - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 264
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 236 CYCKFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWY--TKIKQPEWPSS 409
C + EKK I+Y + V V ++K KR KK +NNKYILFNSWY K ++ SS
Sbjct: 33 CKIRLFEKKKISYRIKVSEVYGPDKKTVKRGKKNNHNNKYILFNSWYNSNKERRDNALSS 92
Query: 410 PAMWDLVKNTPELADFVFIFDHTEKMGKKM 499
MW+ +K+ A + +FD+ EK+GK +
Sbjct: 93 HDMWNHIKSHSSAALVIGLFDYMEKLGKSI 122
>UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 295
Score = 40.3 bits (90), Expect = 0.044
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 308 RKMSKRKKKVI--NNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPE 445
+K S +KKK + +NNKYILF +++K EW SS MW L+ P+
Sbjct: 79 KKSSLKKKKPLLYSNNKYILFTQLISRLKL-EWKSSNKMWSLMGVNPD 125
>UniRef50_Q9JPC7 Cluster: Hypothetical membrane protein; n=1;
Rubrivivax gelatinosus|Rep: Hypothetical membrane
protein - Rhodocyclus gelatinosus (Rhodopseudomonas
gelatinosa)
Length = 408
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 439 RVFHQIPH-GRATRPLGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNV 263
R++H +P GR PL +L +V ++V +LLL G A+VLH R E+ V
Sbjct: 121 RIWHMLPVVGRFNWPLSML-------AWDVVVLVGYLLLNLGLPAYVLHARWRGEEPVTA 173
Query: 262 LFFKKFTIAISWSM 221
+F +AI W++
Sbjct: 174 RYFPVVIVAIFWAV 187
>UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 391
Score = 37.1 bits (82), Expect = 0.41
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +3
Query: 60 KNISSRIQAGRFKGLQK-SNMVNMPEQQSSTETAAVCKNEKLLNKLESS--SYNKSNMDQ 230
+NIS+ R+K L K N+P ++ ET + KN KLL K ES+ Y+K+ M++
Sbjct: 255 RNISN--SENRYKVLSKLPKNNNLPNEEIEMETDQLIKNLKLLQKRESNRIKYSKAEMEE 312
Query: 231 LIAIVNFLKKR 263
L ++ +K+
Sbjct: 313 LTELIQKSEKK 323
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 7 ERKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 120
+RKVC H KRIAR L ++K EY V+ VY W
Sbjct: 89 KRKVCHHDKRIARTLHLEKNLVDEYACSVTHVYSAPKW 126
>UniRef50_A4XAZ2 Cluster: YD repeat protein; n=3; Salinispora|Rep:
YD repeat protein - Salinispora tropica CNB-440
Length = 2007
Score = 36.3 bits (80), Expect = 0.71
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +2
Query: 281 NVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMW-DLVKNTPELADF 457
N+ P +++SK +V+ + Y + W + P P SP +W + T + A
Sbjct: 519 NLTPSFWSSKRVSKISTQVLTSGSYSTVDEWAIGHQFPSAPGSPVLWLSSITRTGKTAGG 578
Query: 458 VFIFDHTEKMGKKMADRRHRRLQATTQQFQRAKKDRLR 571
G +M +R A+ Q ++ + RLR
Sbjct: 579 SITLPALTTYGTRMQNRADYDPDASMQSHEKYRVTRLR 616
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 35.9 bits (79), Expect = 0.94
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 7 ERKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 120
+RKVC HH+RI R L + EY V+ VY++ W
Sbjct: 70 KRKVCNHHRRIKRTLELNLNLVNEYACSVTDVYRSPKW 107
>UniRef50_Q4T887 Cluster: Chromosome undetermined SCAF7865, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7865,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 931
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 599 NSAKFALVSTAVCLFLLAGIAALSLEDDDVVGRPFFYPSFQCDQK*TQNLPIRACFSPN 423
N +F L S C L G ++ ++++G+PF P + D LP++ CFS N
Sbjct: 347 NPTQFQLPSELTCTTALPG-SSKRRRKEELLGKPFRRPQHELDSNGLVPLPVKVCFSCN 404
>UniRef50_UPI000066053B Cluster: PHD finger protein 12 (PHD factor
1) (Pf1).; n=1; Takifugu rubripes|Rep: PHD finger
protein 12 (PHD factor 1) (Pf1). - Takifugu rubripes
Length = 949
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 599 NSAKFALVSTAVCLFLLAGIAALSLEDDDVVGRPFFYPSFQCDQK*TQNLPIRACFSPN 423
N +F L S C L G ++ ++++G+PF P + D LP++ CFS N
Sbjct: 237 NPTQFQLPSELTCTTALPG-SSKRRRKEELLGKPFRRPQHELDSNGLVPLPVKICFSCN 294
>UniRef50_Q7REA2 Cluster: Putative uncharacterized protein PY05163;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY05163 - Plasmodium yoelii
yoelii
Length = 301
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +2
Query: 260 KNINYILNVMPVMQ-DERKMSKRKKKVINNN----KYILFNSWY 376
KN+N+ N + ++ D+ K S + KK NNN YILFN +Y
Sbjct: 14 KNVNFFKNALALLNVDDNKNSMKSKKSTNNNVELDNYILFNLFY 57
>UniRef50_Q24GN9 Cluster: Cyclic nucleotide-binding domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclic
nucleotide-binding domain containing protein -
Tetrahymena thermophila SB210
Length = 1504
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 245 KFLEKKNINYILNVMPVMQ-DERKMSKRKKKVINNNKYILFNSWYT 379
KF NI +LN + +MQ ++RKM K+K+ + ILF+ +YT
Sbjct: 1410 KFFPHNNIESVLNKLKIMQLEQRKMKKQKQINKPRRQNILFSRFYT 1455
>UniRef50_A0E7M0 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1600
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 329 KKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVF 463
KK+INN KY LFN Y +K+ ++P + A+ + +L F F
Sbjct: 9 KKLINNTKYKLFNVVYLILKRQQYPLNVAIISTIIQMAQLLYFSF 53
>UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 988
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +2
Query: 251 LEKKNINYIL---NVMPVMQDERKMSKRKKKV-INNNKYILFN 367
+E KN+N ++ N+ V+ +E+K KRK+K+ I+ NK+IL N
Sbjct: 375 VEAKNMNNLVIEQNIEKVIVEEKKKRKRKEKINIDENKHILIN 417
>UniRef50_UPI0001509CE2 Cluster: Calpain family cysteine protease
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Calpain family cysteine protease containing
protein - Tetrahymena thermophila SB210
Length = 1315
Score = 33.9 bits (74), Expect = 3.8
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 NINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKN-T 439
+INY++ + + Q+E++ KR+ N+ I+ N W Q +W +P D V+
Sbjct: 993 SINYLMQLDYINQEEKENHKRENPHQNHRILIVRNPWGYGEWQLKWSENPDYIDKVQQYM 1052
Query: 440 PELADFVFIFDHTEKMGKKM 499
P++ F FD E KK+
Sbjct: 1053 PKINKF---FDDQETRCKKL 1069
>UniRef50_Q9DVY7 Cluster: PxORF45 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF45 peptide - Plutella xylostella
granulovirus
Length = 252
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 251 LEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMW 421
L+KK + + + V + + K+ + +NN YILF ++K+K W +S MW
Sbjct: 43 LKKKMFDIKMKLEMVPIKKSNLKKKLPSLYSNNTYILFTQLFSKLKL-TWKASNKMW 98
>UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 544
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 KYILFNSWYTKIKQPEWP-SSPAMWDLVKNTPELADFVFIFDHTEKMGKKMA 502
K +L N+ +++QP+ P ++ WDL TP+ +D F+ K+G+++A
Sbjct: 57 KTVLMNNLAERMRQPDSPYNAVVFWDLGHQTPD-SDHAFLKSFCHKLGQELA 107
>UniRef50_Q8KUD0 Cluster: EF0012; n=1; Enterococcus faecalis|Rep:
EF0012 - Enterococcus faecalis (Streptococcus faecalis)
Length = 653
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 248 FLEKKNINYILNVMPVMQDE----RKMSKRKKKVINNNKYILFNSWYTKIKQP--EW 400
++E K I Y++N P + + + SK +KK +N + + YTKI P EW
Sbjct: 468 YMESKRIQYLVNFPPFLPNRIWKNQNPSKGRKKTLNKYTALKVGNLYTKINNPVAEW 524
>UniRef50_A5TTL1 Cluster: Recombination protein J; n=4;
Fusobacterium nucleatum|Rep: Recombination protein J -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 844
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 245 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEW 400
K+L+ I + +++P++ D RK KR + + N+K+I KI W
Sbjct: 211 KYLDIVAIGTVADIVPLISDNRKFVKRGLETLRNSKWIGIKQLLRKIFPDNW 262
>UniRef50_Q4XZJ6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 549
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = -3
Query: 364 KQNVFIVVNHLLLAFGH-FAFVLHDRHYVEDI-VNVLFFKKF 245
KQN +++N+ L F H F++ D++++E++ + LF KKF
Sbjct: 319 KQNFSLLINYFLFIFKHDINFIVQDKNFIENMKMQHLFVKKF 360
>UniRef50_Q6KIG7 Cluster: Ribonuclease; n=1; Mycoplasma mobile|Rep:
Ribonuclease - Mycoplasma mobile
Length = 227
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 248 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFN 367
FLE+K+ N ++ DE+ + K +K++NN K++L N
Sbjct: 100 FLEQKHQNIDYVIIDAFSDEKNIDKYIEKLVNNKKFMLQN 139
>UniRef50_Q8IIV9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1081
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 233 NCYCKFLEKKNINYILNVMPV---MQDERKMSKRKKKVINNNKYILFN 367
N +C+ LE +IN +L+ P +++ K KRKKK++NNN I++N
Sbjct: 703 NFFCE-LEVDDINTLLSKYPFNEKVKENSKNKKRKKKILNNN--IIYN 747
>UniRef50_Q4Y1A1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 69
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 248 FLEKKNINYILNVMPVMQDE--RKMSKRKKKVINN-NKYILF-NSWYTKIK 388
F K INY+LN + + ++M ++K+K+ NN N YI F + Y K+K
Sbjct: 9 FFILKQINYLLNFSNITTKKVCKQMFEKKRKIFNNTNSYIFFIYNLYKKVK 59
>UniRef50_A5E3K0 Cluster: Putative uncharacterized protein; n=3;
Saccharomycetales|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 459
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 299 QDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVFIFDHT 478
++E + K NNNKY++F + P P+ VK P + I +
Sbjct: 297 EEEGNHTSNYNKTNNNNKYVMF-------QLPHLPTYEREKSKVKLEPGIEHSTNITEEA 349
Query: 479 EKMGKKMADRRHRRLQATT 535
EK+GK+ + + R ATT
Sbjct: 350 EKLGKESQEEKTRSAFATT 368
>UniRef50_Q890W4 Cluster: Rubredoxin; n=1; Clostridium tetani|Rep:
Rubredoxin - Clostridium tetani
Length = 433
Score = 32.7 bits (71), Expect = 8.8
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +2
Query: 227 PANCYCK---FLEKKNINYILN--VMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQ 391
P+N Y + E+KNIN ILN V + ++K+ K +N +K IL N Y I
Sbjct: 102 PSNFYLSKENWFEEKNINLILNTAVNNINPVDKKVLLSNGKTLNYDKLILANGGYNFIPP 161
Query: 392 PEWPSSPAMWDL--VKNTPELADFVFIFDHTEKMG 490
E ++ L ++++ + D+ H +G
Sbjct: 162 IEGKDKKGVFTLRGLEDSENIKDYAKKIKHATVIG 196
>UniRef50_Q2S0A6 Cluster: TrkH potassium uptake protein; n=1;
Salinibacter ruber DSM 13855|Rep: TrkH potassium uptake
protein - Salinibacter ruber (strain DSM 13855)
Length = 499
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 442 GRVFHQIPHGRATRP--LGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYV 281
GR Q+ H + RP LG + P V+ + +++ +LLL G F+ D H V
Sbjct: 375 GRELFQMIHPSSVRPMWLGRRTVKEPVVRGILIVILTYLLLVVGGTGFIAVDAHRV 430
>UniRef50_O97242 Cluster: Putative uncharacterized protein MAL3P2.21;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P2.21 - Plasmodium falciparum
(isolate 3D7)
Length = 1114
Score = 32.7 bits (71), Expect = 8.8
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 296 MQDERKMSKRKKKVI-NNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVFIFD 472
M +++K K+KKK++ N NKYI+ + +K E M +L +N I
Sbjct: 847 MSNKKKKKKKKKKILENINKYIIMPEFVIILKSTEELCKKRMMNLPENE-------IIKG 899
Query: 473 HTEKMGKKMADRRHRR 520
H ++MG +RRH++
Sbjct: 900 HNDEMG---FERRHKK 912
>UniRef50_Q7N2H1 Cluster: Succinylglutamate desuccinylase; n=1;
Photorhabdus luminescens subsp. laumondii|Rep:
Succinylglutamate desuccinylase - Photorhabdus
luminescens subsp. laumondii
Length = 325
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -3
Query: 418 HGRATRPLGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNVLF 257
HG T P+ +L + + + + N++L+ FG+ + +R Y+ D +N +F
Sbjct: 51 HGNETAPIEILIQLLAQLAEGTLALKNNVLIIFGNLPAMRTNRRYLHDDLNRMF 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,834,738
Number of Sequences: 1657284
Number of extensions: 14610278
Number of successful extensions: 47601
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 45091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47551
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -