Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060077.seq
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   1.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   1.3  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    25   1.7  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    24   4.0  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    24   5.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   9.1  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 84  AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 176
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 148


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 84  AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 176
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 149


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
 Frame = -3

Query: 424 IPHGRATRPLGLLDLSVPTVKQNVFIVV---NHLLLAFG-----HFAFVLHDRHYVEDIV 269
           IP+ R  RP+ L ++++P  +Q  F      +HLLL  G      F   L   ++ +D V
Sbjct: 556 IPYERTFRPMALSNINLPETEQFRFCNCGWPHHLLLPKGTAEGMKFDLFLMISNFADDTV 615

Query: 268 NVLF 257
           N  F
Sbjct: 616 NQEF 619


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 633 FGVLQLVKRDFNNN 674
           FGV  LV RDFN+N
Sbjct: 414 FGVADLVCRDFNSN 427


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 394 GLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVED 275
           G + +S P+  + VFI +N + L  G   F +H++  + D
Sbjct: 35  GNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTD 74


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 233 NCYCKFLEKKNINYILNVMPVMQDERKMSKRKKK 334
           NC  K    K +  I  +  ++Q+E++ +KR+++
Sbjct: 131 NCAMKEQNAKLLEQITGMCQLLQEEKEEAKRREE 164


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 121 TMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 26
           TM DF      P C+LD I +     W   C+
Sbjct: 150 TMVDFKLLQVIPYCVLDTITYMMGGYWYMACE 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,237
Number of Sequences: 2352
Number of extensions: 16583
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)