Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060072.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 108 4e-24
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 108 4e-24
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 108 4e-24
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 54 7e-08
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 44 8e-05
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 42 4e-04
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 40 0.001
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 39 0.003
Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 30 1.8
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 108 bits (259), Expect = 4e-24
Identities = 61/140 (43%), Positives = 76/140 (54%)
Frame = +1
Query: 253 SAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCL 432
S V++SGKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+
Sbjct: 105 SIVVMSGKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCM 164
Query: 433 GGGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLSPPYXXXXXXXXXXXX 612
GGGLE ALAC YRIAV D KT L + P G +
Sbjct: 165 GGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKK 224
Query: 613 *KLIKXRNWGIVDLLVSPLG 672
K K + GIVD ++ PLG
Sbjct: 225 IKADKAKKIGIVDRVIQPLG 244
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/55 (65%), Positives = 40/55 (72%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFPSWD 674
EVMLGLLPG GGTQRLP LT++ LDL LTGK +KADKAKK+G V P D
Sbjct: 191 EVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRVIQPLGD 245
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 108 bits (259), Expect = 4e-24
Identities = 61/140 (43%), Positives = 76/140 (54%)
Frame = +1
Query: 253 SAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCL 432
S V++SGKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+
Sbjct: 79 SIVVMSGKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCM 138
Query: 433 GGGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLSPPYXXXXXXXXXXXX 612
GGGLE ALAC YRIAV D KT L + P G +
Sbjct: 139 GGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKK 198
Query: 613 *KLIKXRNWGIVDLLVSPLG 672
K K + GIVD ++ PLG
Sbjct: 199 IKADKAKKIGIVDRVIQPLG 218
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/55 (65%), Positives = 40/55 (72%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFPSWD 674
EVMLGLLPG GGTQRLP LT++ LDL LTGK +KADKAKK+G V P D
Sbjct: 165 EVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRVIQPLGD 219
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 108 bits (259), Expect = 4e-24
Identities = 61/140 (43%), Positives = 76/140 (54%)
Frame = +1
Query: 253 SAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCL 432
S V++SGKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+
Sbjct: 105 SIVVMSGKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCM 164
Query: 433 GGGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLSPPYXXXXXXXXXXXX 612
GGGLE ALAC YRIAV D KT L + P G +
Sbjct: 165 GGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKK 224
Query: 613 *KLIKXRNWGIVDLLVSPLG 672
K K + GIVD ++ PLG
Sbjct: 225 IKADKAKKIGIVDRVIQPLG 244
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/55 (65%), Positives = 40/55 (72%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFPSWD 674
EVMLGLLPG GGTQRLP LT++ LDL LTGK +KADKAKK+G V P D
Sbjct: 191 EVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRVIQPLGD 245
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 99 bits (238), Expect = 1e-21
Identities = 58/138 (42%), Positives = 72/138 (52%)
Frame = +1
Query: 259 VIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGG 438
V++SGKP F+AGADI M + KT V +L + G + IE S+KP +AAI GSC+GG
Sbjct: 81 VVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLREGQKQLLTIELSQKPIVAAIMGSCMGG 140
Query: 439 GLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLSPPYXXXXXXXXXXXX*K 618
GLE ALAC YRIAV D KT GL + P G + K
Sbjct: 141 GLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTGKRIK 200
Query: 619 LIKXRNWGIVDLLVSPLG 672
K GIVD ++ PLG
Sbjct: 201 ANKAMKIGIVDRVIQPLG 218
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFPSWDQV 680
EV LG++PG GGTQRLP LT++ LDL LTGK +KA+KA K+G V P D +
Sbjct: 165 EVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTGKRIKANKAMKIGIVDRVIQPLGDGI 221
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 54.4 bits (125), Expect = 7e-08
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 VIISGK-PGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 435
VI++ K F +GAD+ +++E + F +E+ +P IAAI G LG
Sbjct: 80 VILNSKCDNVFCSGADLKE-RKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALG 138
Query: 436 GGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEG 546
GGLE ALAC R+A + +K GL ++ W P G
Sbjct: 139 GGLELALACDIRVASQKAK--MGLVETKWALIPGAGG 173
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLG 641
E L+PG GG+QRL + + +L T + + A KLG
Sbjct: 162 ETKWALIPGAGGSQRLYRIVGVAKAKELIYTAEVLNGADAAKLG 205
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Frame = +1
Query: 259 VIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRI----------EQSRKPYI 408
VI+ G+ F +G D+S + EE ++RG I R I ++ KP I
Sbjct: 58 VILQGEGKHFCSGLDLSEV-TFLNGEEADDSARRGRSILRTIKFMQKQFTYIDECSKPVI 116
Query: 409 AAIQGSCLGGGLETALACKYRIAVKDS 489
A+ G CLG L+ A AC R+A KD+
Sbjct: 117 LAMHGYCLGAALDIATACDVRVATKDA 143
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +1
Query: 256 AVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 435
A++I+G F AGADI + N E + S + + +KP IAA+ G LG
Sbjct: 82 AIVITGSERAFAAGADIKEMTN---NEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALG 138
Query: 436 GGLETALACKYRIAVKDSKTG 498
GG E A+ C A + ++ G
Sbjct: 139 GGNELAMMCDIIYAGEKARFG 159
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 495 RIWTTEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFPSWD 674
R E+ +G +PG GGTQR +++ LTG V A +AK+ G + FP+ D
Sbjct: 157 RFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKI-FPA-D 214
Query: 675 QVL 683
QV+
Sbjct: 215 QVV 217
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 262 IISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGG 441
++ G+ G F AG D+ + + +E + + I + +KP IAAI+G + GG
Sbjct: 54 VLYGEGGTFCAGYDLESVSKAEHQEVSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGG 113
Query: 442 LETALACKYRIAVKDSKTG 498
LE +L R++ +K G
Sbjct: 114 LELSLMADLRVSSPSAKFG 132
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 540 GGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVS 659
GGT RLP + + LD+ LTG+ V A +A + G +S
Sbjct: 145 GGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRIS 184
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Frame = +1
Query: 256 AVIISGKPGCFIAGADIS--MIENCKT-KEEVVSLSKRGH----------EIFRRIEQSR 396
++IISG+ F AG DI+ + + + +++ + + ++G + + +E+
Sbjct: 73 SIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTALERCP 132
Query: 397 KPYIAAIQGSCLGGGLETALACKYRIAVKDS 489
KP IA+I CLG G++ AC R+A +D+
Sbjct: 133 KPIIASIHSHCLGAGIDLITACDIRVASQDA 163
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 259 VIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGG 438
+++SG F +GAD+ +I++ ++ V + + I + S IA I G LGG
Sbjct: 72 IVVSGVGKSFCSGADLGLIKDISDQKLGVQMFEYMSSILSLLHSSPAISIAKIHGHALGG 131
Query: 439 GLETALACKYRIAVKDSKTGF 501
E + RIA SK F
Sbjct: 132 ATEICSSTDIRIAHSGSKIAF 152
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 510 EVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGNCRSVSFP 665
E+ +G +PG GGTQR P S +++ L+G + A +AK+ G V FP
Sbjct: 130 EITIGTIPGLGGTQRWPRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKV-FP 180
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 259 VIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEI-FRRIEQSRKPYIAAIQGSCLG 435
++++G F AGADI + K E + + + + + KP IAA+ G LG
Sbjct: 51 IVLTGSEKAFAAGADIKEM----AKLEFADVFENDYFTNWDTLSHITKPVIAAVNGFALG 106
Query: 436 GGLETALAC 462
GG E AL C
Sbjct: 107 GGTELALMC 115
>Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical
protein F15H10.7 protein.
Length = 666
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +2
Query: 95 VPASQVHTKC-KLVNGVYVVTLDSPNVKVNSL----NTQVMEEVSNIVNEIETNSGIEVQ 259
VP + HT K+ + V+ +T +S N+ + + TQ++ + SNI N++ S +
Sbjct: 136 VPLNLTHTSSIKISDEVFQITCESDNLLKSEIFKYHYTQIVPKSSNIKNKVIEQSTSDFP 195
Query: 260 SLYQASLDASLQG-LI*A*SKTAKQRKKLS-VCLKEDMKYSEESNNHGN 400
S+ LD+ +G + KT K K+ + ++ MK + N +GN
Sbjct: 196 SVIMIGLDSMSRGNFVRQMQKTYKYMKEAGFIDMEGHMKIHD--NTYGN 242
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 494 QDLDYRSHVGTFARRWRDTEITCSHLHTYNFG 589
Q Y S GT+ +WR E H T++FG
Sbjct: 638 QGSHYCSRAGTYIMQWRVPETAAGHSSTFDFG 669
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 149 VTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGI 250
V D PN+K NSL Q + + IV I +GI
Sbjct: 373 VNSDIPNLKYNSLLPQKLHLIGYIVQVINNKNGI 406
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 397 KPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLS 567
K Y+ I G +GGG ++ ++R+A + KT + ++ P V G Y LS
Sbjct: 113 KQYVCLIDGIVMGGGCGLSVNGRFRVATE--KTMLAMPETALGLFPDVGG--SYFLS 165
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 397 KPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLQKSCWDFCPAVEGHRDYLLS 567
K Y+ I G +GGG ++ ++R+A + KT + ++ P V G Y LS
Sbjct: 136 KQYVCLIDGIVMGGGCGLSVNGRFRVATE--KTMLAMPETALGLFPDVGG--SYFLS 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,848,739
Number of Sequences: 27780
Number of extensions: 369942
Number of successful extensions: 1113
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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