Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060071.seq
         (659 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17KR6 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_A3UAF7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q17KR6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1427

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -2

Query: 217 IADSLKCWIRFLHDTN*NLFRRNSQRIPGVRGKLKPFFSYYRSQSARTES 68
           + D L+ W+  +  T  ++F+ N+QRI      L+ F SY  S ++R ES
Sbjct: 413 VHDDLRIWLCLVDATMMHMFQENTQRIEVYSAVLEVFHSYVSSNASRHES 462


>UniRef50_A3UAF7 Cluster: Putative uncharacterized protein; n=1;
           Croceibacter atlanticus HTCC2559|Rep: Putative
           uncharacterized protein - Croceibacter atlanticus
           HTCC2559
          Length = 361

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +2

Query: 347 LIYIRELIISIFGVGYIILYGFKCHFFFXID*MNLRFRS*FDFTTLEVFVRLR*KYLIMI 526
           ++Y    I+S  GVG I+ YG    FFF +     RF     F T+  F+ +   +LI+ 
Sbjct: 287 VLYSFAFILSYIGVGQIVFYGATLIFFFYLYKAMRRFYKQRRFKTIVKFIIVNFVFLILA 346

Query: 527 AV 532
            V
Sbjct: 347 FV 348


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,032,824
Number of Sequences: 1657284
Number of extensions: 8176764
Number of successful extensions: 14135
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14131
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)