Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060071.seq
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069370-1|AAL39515.1|  863|Drosophila melanogaster LD07688p pro...    29   7.4  
AE014297-2741|AAF55729.1|  863|Drosophila melanogaster CG12254-P...    29   7.4  

>AY069370-1|AAL39515.1|  863|Drosophila melanogaster LD07688p
           protein.
          Length = 863

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 177 SCKKRIQHFNESAMLIHIVSDLRSPML*KSFVRLEGD 287
           SC++    FNE  + + I++  + P+L K F++ +GD
Sbjct: 161 SCEQLAALFNERKINLSIIAPRKMPVLFKLFMKADGD 197


>AE014297-2741|AAF55729.1|  863|Drosophila melanogaster CG12254-PA
           protein.
          Length = 863

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 177 SCKKRIQHFNESAMLIHIVSDLRSPML*KSFVRLEGD 287
           SC++    FNE  + + I++  + P+L K F++ +GD
Sbjct: 161 SCEQLAALFNERKINLSIIAPRKMPVLFKLFMKADGD 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,886,163
Number of Sequences: 53049
Number of extensions: 361996
Number of successful extensions: 558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)