Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060070.seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110984-1|AAI10985.1|  514|Homo sapiens KPL2 protein protein.         31   3.8  
AK058124-1|BAB71674.1|  514|Homo sapiens protein ( Homo sapiens ...    31   3.8  

>BC110984-1|AAI10985.1|  514|Homo sapiens KPL2 protein protein.
          Length = 514

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -2

Query: 415 KLYIERYRRNVNLA*GASGRT*GRNKSNWLVYQAADILQKYQIPHLVTRQTDSTLMKIAY 236
           +LYI   ++  +   G   +T  R  +  L    +D  Q+ ++ H++ RQTD  LM+I Y
Sbjct: 99  QLYIALQKKKKSGLTGVEMQTMQRLTNLRLQNMKSDTFQE-RLRHMIPRQTDFNLMRITY 157

Query: 235 RY 230
           R+
Sbjct: 158 RF 159


>AK058124-1|BAB71674.1|  514|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25395 fis, clone TST02553. ).
          Length = 514

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -2

Query: 415 KLYIERYRRNVNLA*GASGRT*GRNKSNWLVYQAADILQKYQIPHLVTRQTDSTLMKIAY 236
           +LYI   ++  +   G   +T  R  +  L    +D  Q+ ++ H++ RQTD  LM+I Y
Sbjct: 99  QLYIALQKKKKSGLTGVEMQTMQRLTNLRLQNMKSDTFQE-RLRHMIPRQTDFNLMRITY 157

Query: 235 RY 230
           R+
Sbjct: 158 RF 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,193,417
Number of Sequences: 237096
Number of extensions: 1585307
Number of successful extensions: 2886
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2885
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)