Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060067.seq
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p pro...    31   1.5  
AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-P...    31   1.5  
AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-P...    31   1.5  

>AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p
           protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 464 FIRSHYYWRSRPYGISYPPLRSRLHQPDHQIPDSIHQPXQT 586
           F   HYYW     GI    LRS LH P   +P ++ +P ++
Sbjct: 60  FAWRHYYWYLTNEGIE--ELRSYLHLPPEIVPSTLKRPARS 98


>AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-PC,
           isoform C protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 464 FIRSHYYWRSRPYGISYPPLRSRLHQPDHQIPDSIHQPXQT 586
           F   HYYW     GI    LRS LH P   +P ++ +P ++
Sbjct: 60  FAWRHYYWYLTNEGIE--ELRSYLHLPPEIVPSTLKRPARS 98


>AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-PB,
           isoform B protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 464 FIRSHYYWRSRPYGISYPPLRSRLHQPDHQIPDSIHQPXQT 586
           F   HYYW     GI    LRS LH P   +P ++ +P ++
Sbjct: 60  FAWRHYYWYLTNEGIE--ELRSYLHLPPEIVPSTLKRPARS 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.126    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,970,933
Number of Sequences: 53049
Number of extensions: 370723
Number of successful extensions: 1126
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)