Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060065.seq
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 128 2e-28
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 125 9e-28
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 124 3e-27
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 119 6e-26
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 117 2e-25
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 109 8e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 107 2e-22
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 104 2e-21
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 102 1e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 101 2e-20
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 3e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 99 9e-20
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 97 5e-19
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 96 8e-19
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 96 8e-19
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 85 1e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 83 8e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 78 2e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 69 1e-10
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 63 5e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 62 1e-08
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 62 1e-08
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 61 3e-08
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 57 4e-07
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 57 5e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 49 9e-05
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 47 5e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 46 9e-04
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 45 0.002
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 45 0.002
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.019
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 40 0.058
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.31
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.2
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.2
UniRef50_Q6K7C3 Cluster: Putative uncharacterized protein OJ1342... 35 1.6
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.8
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 34 3.8
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 5.0
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 5.0
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 6.6
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 6.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 8.8
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 128 bits (308), Expect = 2e-28
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 55 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH IE++PELPLVV DKV+ KTK+AV+ L++L AW+DI KVY SQR+RAG GKMRNRR
Sbjct: 141 GHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR 200
Query: 691 R 693
R
Sbjct: 201 R 201
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 91 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 125 bits (302), Expect = 9e-28
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 172 SVEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1
Query: 118 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY V+
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVS 172
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 124 bits (298), Expect = 3e-27
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 58 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI KVYKSQR RAG G MR+RR
Sbjct: 144 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRR 203
Query: 691 R 693
R
Sbjct: 204 R 204
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 85 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 119 bits (287), Expect = 6e-26
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S++AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 54 SEKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +1
Query: 100 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVARR 264
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY V+ +
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMR 681
GH I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAG GK+R
Sbjct: 140 GHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLR 199
Query: 682 NRR 690
RR
Sbjct: 200 GRR 202
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 117 bits (282), Expect = 2e-25
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 261 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
+AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 33 KAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKV---QEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMR 681
GH + +PE+PLV++ I KT AV L+ + A +D K S++LRAG GK+R
Sbjct: 117 GHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLR 176
Query: 682 NRR 690
RR
Sbjct: 177 GRR 179
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 109 bits (261), Expect = 8e-23
Identities = 48/63 (76%), Positives = 58/63 (92%)
Frame = +1
Query: 505 G*GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRN 684
G G++++ + E+PLVV+DK+QEINKTKQAVIFLRR+ AWSD+LKVYKSQRLRAG GKMRN
Sbjct: 4 GRGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 63
Query: 685 RRR 693
RRR
Sbjct: 64 RRR 66
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 107 bits (258), Expect = 2e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
AG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 58 AGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+
Sbjct: 141 GHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRK 200
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 91 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 255
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 104 bits (249), Expect = 2e-21
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
SK +G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 54 SKMSGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1
Query: 103 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVAR 261
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y V++
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYK-SQRLRAGXGK 675
GH IE + E+P+VV D +++INKTK AV L + +++ ++ K + R R G K
Sbjct: 140 GHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 102 bits (244), Expect = 1e-20
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S +AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 56 STKAGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 490 PSARSG*GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAW--SDILKVYKSQRLRA 663
PS GH I +PELPLV+++++Q INKT AV F + ++ ++ S +R
Sbjct: 135 PSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRC 194
Query: 664 GXGKMRNRRR 693
G GKMRNRRR
Sbjct: 195 GKGKMRNRRR 204
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 91 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVARR 264
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y V+ +
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTK 58
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 101 bits (241), Expect = 2e-20
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ +G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 54 SRMSGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 97 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVAR 261
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y ++R
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMR 681
GH +E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + GK R
Sbjct: 140 GHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 100 bits (240), Expect = 3e-20
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = +3
Query: 261 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
+AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 58 QAGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 142 GHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKK 201
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 106 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 255
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAV 55
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.1 bits (236), Expect = 9e-20
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
+G SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 57 SGMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +1
Query: 490 PSARSG*GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGX 669
PS GH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG
Sbjct: 133 PSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGR 192
Query: 670 GKMRNRR 690
GKMRNRR
Sbjct: 193 GKMRNRR 199
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +1
Query: 100 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVAR 261
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V R
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 96.7 bits (230), Expect = 5e-19
Identities = 41/58 (70%), Positives = 45/58 (77%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 50 SSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
G+ ++ IPE+P V+ D +++I KT+ + L L + I++ ++L++G GKMRNRR
Sbjct: 136 GYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 95.9 bits (228), Expect = 8e-19
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/67 (50%), Positives = 44/67 (65%)
Frame = +1
Query: 490 PSARSG*GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGX 669
PS GH I+ +PELPLVV+D V++I KTK+AV L L A D+ +S+R+R G
Sbjct: 134 PSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGS 193
Query: 670 GKMRNRR 690
GK RNRR
Sbjct: 194 GKARNRR 200
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 109 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 249
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 95.9 bits (228), Expect = 8e-19
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
SK AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 52 SKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH I + LP++V+D + + KTK AV LR L ++ +V KS+ +R G GKMRNRR
Sbjct: 138 GHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRR 197
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 112 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVAR 261
++ Y TV+ LP VF PIR DLV + +RQPY V++
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSK 53
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
S +AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 55 STKAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 490 PSARSG*GHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAG 666
P+ S GH I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG
Sbjct: 134 PALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAG 193
Query: 667 XGKMRNRR 690
GKMR R+
Sbjct: 194 QGKMRGRK 201
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 100 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVARR 264
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP V+ +
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTK 57
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRN 684
GH I ++PELPLVV DKV+ KT++AV+ L++L AW+DI KVY SQR+RAG GKMRN
Sbjct: 4 GHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.2 bits (184), Expect = 2e-13
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +3
Query: 249 LRSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
++ +G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMR 681
GH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ GK R
Sbjct: 138 GHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR 194
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +1
Query: 97 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 249
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1
Query: 490 PSARSG*GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGX 669
PS GH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+G
Sbjct: 137 PSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGK 196
Query: 670 GKMRNRR 690
GKMRNRR
Sbjct: 197 GKMRNRR 203
Score = 35.9 bits (79), Expect = 0.94
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 148 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 234
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 559 KVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
KV+ KTK+ V+ L++L AW+DI KVY SQR+RAG GKMRNRR
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR 141
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGG 341
S+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 45 SESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH++EK+P LP+VV ++IN+ K+A L W D+ + + ++RAG GKMR RR
Sbjct: 158 GHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
Score = 40.3 bits (90), Expect = 0.044
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
AG + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 78 AGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 62.1 bits (144), Expect = 1e-08
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAG GK R RR
Sbjct: 135 GHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRR 194
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 425
AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH IE +PELPLV+ D + + KT A+ L++ A+ D K S + G GKMRNRR
Sbjct: 4 GHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRR 63
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/57 (52%), Positives = 34/57 (59%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
S+ AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 51 SRYAGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG GKMRNRR
Sbjct: 131 GHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRR 188
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 106 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVAR 261
P V V+ V A P P VF P+RPD++N VH + K R PY V+R
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH ++ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG GKMR RR
Sbjct: 132 GHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRR 191
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+ + P+VV D + + T + FL+++ + D+ +V + R+RAG GKMR R+
Sbjct: 137 GHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRK 196
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 252 RSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 404
R AG +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 46.8 bits (106), Expect = 5e-04
Identities = 16/60 (26%), Positives = 37/60 (61%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH + ++ ++P V+ D+++ + TK+ + L DI++ K +++++G GK+R R+
Sbjct: 131 GHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRK 190
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 410
AG +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 514 HIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
H+ E ELP VV+++++ + +TK R + ++D+ + + +R RAG GKMR RR
Sbjct: 131 HVFEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRR 187
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 264 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 425
+G S E+WG G AR+PR + G + GGR P KP R+W
Sbjct: 52 SGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 550 VADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKK 47
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 216 RFYVQELEAALL---RSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 386
R ++ E A L R AG +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 387 GRMFAPTK 410
GR P +
Sbjct: 101 GRAAHPPR 108
Score = 36.3 bits (80), Expect = 0.71
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 538 LPLVVADKV-QEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
LP+V+ V +I+ ++A L + + D+L+ + +R AG GKMR RR
Sbjct: 151 LPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRR 202
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 338 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 442
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 39.9 bits (89), Expect = 0.058
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNR 687
GHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAG GK R R
Sbjct: 145 GHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGR 199
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 264 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 410
AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 312 ARIPRVRGGGTHRSGQGAFGNMCRGG 389
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 396 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 262
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 372 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 262
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 396 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 259
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_Q6K7C3 Cluster: Putative uncharacterized protein
OJ1342_D02.5; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1342_D02.5 - Oryza sativa subsp. japonica (Rice)
Length = 110
Score = 35.1 bits (77), Expect = 1.6
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Frame = -2
Query: 372 YRRHPDRTYEYHHHGHAEFGRQ----HVQYPMIQ-HWFGDQPPCYAVGLPRV-LGHRNVN 211
YR P HG AEF RQ H +P HW +PP A G+P LG
Sbjct: 19 YRYRPSPMLPELSHGVAEFSRQSTRRHAPWPPSGGHWSSSEPPLVAAGMPSPGLGRTR-- 76
Query: 210 IIDQVRTDGRLEHEREG 160
DGR E E +G
Sbjct: 77 -RASAPLDGRREEEDDG 92
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 384 HDTCYRRHPDRTYEYHHHGHAEFGRQH 304
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 228 QELEAALLRSKEAGHQTS--AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 392
+EL A S A + A+SW TGRA A + R R GG R A N G R
Sbjct: 16 RELARAAASSVAANREGGGGAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 3.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 393 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 280
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 387 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPCY 253
HH + H T+ H HGH G H +P H G P C+
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 369 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 274
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +2
Query: 299 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 463
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 464 GGSVAATGVPA 496
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 33.1 bits (72), Expect = 6.6
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 81 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLRSK 260
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 261 EAGHQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 398
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 402 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 265
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 399 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 307
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 421 VGTVASTSDSGERPWRQRCCYRRPSARS 504
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,368,917
Number of Sequences: 1657284
Number of extensions: 13839503
Number of successful extensions: 46544
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 42933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46036
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -