Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060065.seq
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 124 2e-28
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 124 2e-28
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 124 2e-28
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 124 2e-28
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 119 4e-27
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 1.5
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 1.5
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.0
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.0
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.0
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.5
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 29 4.5
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.5
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 124 bits (298), Expect = 2e-28
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 58 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI KVYKSQR RAG G MR+RR
Sbjct: 144 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRR 203
Query: 691 R 693
R
Sbjct: 204 R 204
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 85 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 124 bits (298), Expect = 2e-28
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 58 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI KVYKSQR RAG G MR+RR
Sbjct: 144 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRR 203
Query: 691 R 693
R
Sbjct: 204 R 204
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 85 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 124 bits (298), Expect = 2e-28
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 58 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI KVYKSQR RAG G MR+RR
Sbjct: 144 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRR 203
Query: 691 R 693
R
Sbjct: 204 R 204
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 85 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 124 bits (298), Expect = 2e-28
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 255 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
S+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 58 SELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILKVYKSQRLRAGXGKMRNRR 690
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI KVYKSQR RAG G MR+RR
Sbjct: 144 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRR 203
Query: 691 R 693
R
Sbjct: 204 R 204
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 85 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVA 258
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 119 bits (286), Expect = 4e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +3
Query: 270 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 428
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53
Score = 63.3 bits (147), Expect = 3e-10
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +1
Query: 511 GHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLXAWSDILK 636
GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL W+DI K
Sbjct: 82 GHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 390 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 259
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 390 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 259
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 302 TCCRP-NSACPWWWYS*VRSGC 364
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 302 TCCRP-NSACPWWWYS*VRSGC 364
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 302 TCCRP-NSACPWWWYS*VRSGC 364
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 90 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 203
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -2
Query: 387 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH--WFGDQPPCYAVGLPRVLGHRNV 214
HH + H +++H H +Q Q +Q + G P ++ ++ +
Sbjct: 66 HHHAHHSHHQQHLHQHHSHLSQRHQQQQQQQQQLQQTSFIGSPPSSASITTAQLHSAFSR 125
Query: 213 NIIDQVRTDGRLEH-EREGLGC 151
I +Q D R + +RE +GC
Sbjct: 126 RIAEQRERDQRDQRDQREAVGC 147
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 90 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 203
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,377,605
Number of Sequences: 53049
Number of extensions: 676707
Number of successful extensions: 4108
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3966
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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