Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060062.seq
(339 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 73 1e-12
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 72 2e-12
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 69 2e-11
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 67 6e-11
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 54 8e-11
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 59 2e-09
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 62 2e-09
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 62 3e-09
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 58 3e-08
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 58 4e-08
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 58 5e-08
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 57 9e-08
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 50 8e-07
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 53 1e-06
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 51 4e-06
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 50 1e-05
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 47 1e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 43 0.001
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.10
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 35 0.41
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 35 0.41
UniRef50_A5DMC2 Cluster: Predicted protein; n=1; Pichia guillier... 33 1.3
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 33 1.7
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 32 2.2
UniRef50_Q5GIG7 Cluster: UDP-glucose:flavonoid-O-glucosyltransfe... 31 3.8
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 31 3.8
UniRef50_UPI0000519AB6 Cluster: PREDICTED: similar to Sodium/pot... 31 5.1
UniRef50_Q8EMJ9 Cluster: Muconate cycloisomerase; n=2; Bacillace... 31 6.7
UniRef50_Q14HR9 Cluster: Major facilitator superfamily (MFS) tra... 31 6.7
UniRef50_Q6NUN9 Cluster: Zinc finger protein 746; n=16; Eutheria... 31 6.7
UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2; ... 30 8.8
UniRef50_A2WP06 Cluster: Putative uncharacterized protein; n=2; ... 30 8.8
UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 73.3 bits (172), Expect = 1e-12
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+V VH M+KN RQPY VS++AGHQT AESWGTGR A
Sbjct: 30 PIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVA 73
Score = 35.5 bits (78), Expect = 0.24
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRV GGGTHR
Sbjct: 69 GRAVARIPRVSGGGTHR 85
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 68.9 bits (161), Expect = 2e-11
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
P+RPD+V+ VH + KN RQPY VS EAGHQT AESWGTGR A
Sbjct: 148 PLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVA 191
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 187 GRAVARIPRVRGGGTHR 203
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 67.3 bits (157), Expect = 6e-11
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN+VH + +N+RQ Y VS+ AGHQT AESWGTGR A
Sbjct: 34 PIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVA 77
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 73 GRAVARIPRVRGGGTHR 89
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 53.6 bits (123), Expect(2) = 8e-11
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIR D+V VH +M+KNSRQ Y V++ +G A SWGTGR A
Sbjct: 30 PIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVA 73
Score = 33.5 bits (73), Expect(2) = 8e-11
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 181 GRMFAPTKPXRSWXRRVNL 237
GRMFAPTK R W R++NL
Sbjct: 98 GRMFAPTKIFRRWHRKINL 116
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 58.8 bits (136), Expect(2) = 2e-09
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
P+R DLV V +MSKN RQ Y VS +AGHQ AESWGTGR A
Sbjct: 32 PLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVA 75
Score = 23.4 bits (48), Expect(2) = 2e-09
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 181 GRMFAPTKPXRSWXRRVN 234
G MF+P K R + R++N
Sbjct: 100 GHMFSPNKTYRRFHRKIN 117
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = +1
Query: 16 LSXEFRVSVVVV--LIGXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRM 189
+S E R+ ++ + P+R DLV+ VH +MSKN RQ Y +S+ +G+QT A SWGTGR
Sbjct: 12 VSTEKRMGSTIMPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRA 71
Query: 190 FAPT 201
+ T
Sbjct: 72 LSRT 75
Score = 33.5 bits (73), Expect = 0.95
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRA+ R PRV+GGGTHR
Sbjct: 69 GRALSRTPRVKGGGTHR 85
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 100 SMSKNSRQPYCVSKEAGHQTXAESWGTGRMFAPTKPXRSWXRRVNL 237
++S+ R + +G A G MFAPT+ R W R++NL
Sbjct: 71 ALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINL 116
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 61.7 bits (143), Expect = 3e-09
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
P+R DLV VH +MSKN RQ Y VSK +G+QT A SWGTGR A
Sbjct: 30 PLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMA 73
Score = 35.1 bits (77), Expect = 0.31
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRA+ R+PRV+GGGTHR
Sbjct: 69 GRAMARVPRVKGGGTHR 85
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 145 AGHQTXAESWGTGRMFAPTKPXRSWXRRVNL 237
AG A G M+APT+ R W R+VNL
Sbjct: 86 AGQAAYANFCRAGGMYAPTRVWRRWHRKVNL 116
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 58.4 bits (135), Expect = 3e-08
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+V+ VH++++KN RQP+ AGHQ AESWGTGR A
Sbjct: 31 PIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVA 74
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 58.0 bits (134), Expect = 4e-08
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 76 DLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFAP 198
D+VN VH ++ KN QPY VS+ AG+QT AESWGTGR P
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGP 65
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+V+ VH +++KN RQ + V+ +AG Q AESWGTGR A
Sbjct: 32 PIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVA 75
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRV G GTHR
Sbjct: 71 GRAVARIPRVSGSGTHR 87
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 56.8 bits (131), Expect = 9e-08
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 43 VVVLIGXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
+ V+ PIR DL+ + +MSKN R PY V AG++T AESWGTGR A
Sbjct: 24 IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVA 74
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRV GGGTHR
Sbjct: 70 GRAVARIPRVPGGGTHR 86
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 50.0 bits (114), Expect(2) = 8e-07
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIR D+V+ V+ + SKN+RQP VS +AG Q A SWGTGR A
Sbjct: 31 PIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVA 74
Score = 23.4 bits (48), Expect(2) = 8e-07
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 181 GRMFAPTKPXRSWXRR 228
G MF+P K R W R+
Sbjct: 99 GHMFSPLKNFRKWQRK 114
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 52.8 bits (121), Expect = 1e-06
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
P+RPD++N VH + K R PY VS+ AG Q A SWG GR A
Sbjct: 27 PLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVA 70
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIR DLV + +RQPY VSK AG Q AESWGTGR A
Sbjct: 28 PIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIA 71
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRA+ R+PRV+GGGT R
Sbjct: 67 GRAIARVPRVKGGGTRR 83
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 49.6 bits (113), Expect = 1e-05
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +1
Query: 67 IRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGR 186
IR D+V VH +M KN RQ Y VS AG T A SWGTGR
Sbjct: 27 IRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGR 66
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV R+PRV G GTHR
Sbjct: 65 GRAVSRVPRVPGSGTHR 81
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 46.8 bits (106), Expect = 1e-04
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGR 186
PIR ++V +V+V+++KN++QP+ AG + A SWGTGR
Sbjct: 28 PIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGR 68
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTG 183
P+R DL+ ++ N RQPY AG +T AESWG G
Sbjct: 25 PVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAG 64
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 36.7 bits (81), Expect = 0.10
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 109 KNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
++++ V +AGHQT AESWGTGR A
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVA 50
Score = 35.5 bits (78), Expect = 0.24
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRV GGGTHR
Sbjct: 46 GRAVARIPRVSGGGTHR 62
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 145 AGHQTXAESWGTGRMFAPTKPXRSWXRRVNL 237
AG +GRMFAPTK R W +++NL
Sbjct: 63 AGQAAFGNMCRSGRMFAPTKVWRKWHQKINL 93
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 70 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGR 186
RPD++ +SM QP+ AG +T AES+G+GR
Sbjct: 28 RPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGR 66
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 34.7 bits (76), Expect = 0.41
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFAPTKPXRSWXRRV 231
P+R DL+ + N +Q Y + AG +T AES+G+GR A RRV
Sbjct: 25 PVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRV 80
>UniRef50_A5DMC2 Cluster: Predicted protein; n=1; Pichia
guilliermondii|Rep: Predicted protein - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 180
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 11 TCCRPNSACPWWWYS*VRPSVRTWSMMFTFLCPRTRGSP 127
+CC+ AC WW SVRT S + T CP R SP
Sbjct: 113 SCCKGRHACNGWW------SVRTRSSLETRFCPGRRLSP 145
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 49 VLIGXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWG 177
++ P+R DL+ V ++ +S QP AG +T AES+G
Sbjct: 27 IIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFG 69
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTG 183
PIRPDL+ ++S QP V + AG + ES+G G
Sbjct: 51 PIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVG 90
>UniRef50_Q5GIG7 Cluster:
UDP-glucose:flavonoid-O-glucosyltransferase; n=15; core
eudicotyledons|Rep:
UDP-glucose:flavonoid-O-glucosyltransferase - Beta
vulgaris (Sugar beet)
Length = 492
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 13 VLSXEFRVSVVVVLIGXPIRPDLVNDVHVSMSKNSRQP 126
++ R+S+V+++I P L+ND S S+N+ P
Sbjct: 37 IIQRNHRISIVILIINIPTTTSLINDFVHSQSRNNPYP 74
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 70 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
RPD++ +++ + RQPY + +G E+WG G +A
Sbjct: 27 RPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYA 68
>UniRef50_UPI0000519AB6 Cluster: PREDICTED: similar to
Sodium/potassium/calcium exchanger
(Na(+)/K(+)/Ca(2+)-exchange protein); n=2;
Endopterygota|Rep: PREDICTED: similar to
Sodium/potassium/calcium exchanger
(Na(+)/K(+)/Ca(2+)-exchange protein) - Apis mellifera
Length = 658
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 150 TSLLAHAVG--LPRVLGHRNVNIIDQVRTDGRTYEYHHHGHAEFG 22
T LLAH+V P G+ N N D DG HHH H + G
Sbjct: 57 TPLLAHSVNGTWPPPNGNENNNEADLRAEDGYNSSVHHHHHKKVG 101
>UniRef50_Q8EMJ9 Cluster: Muconate cycloisomerase; n=2;
Bacillaceae|Rep: Muconate cycloisomerase -
Oceanobacillus iheyensis
Length = 391
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 153 VTSLLAHAVGLPRVLGHRNVNIIDQVRTD 67
+T L HAVG+PR G N ++I ++ TD
Sbjct: 3 ITDLELHAVGIPRHTGFVNKHVIVKIHTD 31
>UniRef50_Q14HR9 Cluster: Major facilitator superfamily (MFS)
transport protein; n=9; Francisella tularensis|Rep:
Major facilitator superfamily (MFS) transport protein -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 419
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +1
Query: 28 FRVSVVVVLIGXPIRPDLVNDVHVSMSKNSRQP------YCVSKEAGHQTXAESWGTGRM 189
F VS V ++G PI PD ND+H+++S+ P Y +S AG+ E +G+ +M
Sbjct: 16 FAVSFVTNILG-PIIPDATNDLHLTLSQAGVLPFAFFIAYIISIPAGY--ALEKYGSKKM 72
>UniRef50_Q6NUN9 Cluster: Zinc finger protein 746; n=16;
Eutheria|Rep: Zinc finger protein 746 - Homo sapiens
(Human)
Length = 644
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 75 GPGQ*CSRFYVQELEAALLREQGGWSPNQX*IMGYWTYVRPHEALXELXPS 227
GPGQ +RF+ + QG P+Q ++G RP + EL P+
Sbjct: 312 GPGQ-ATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARPERDMGELSPA 361
>UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 711
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 159 GLVTSLLAHAVGLPRVLGHRNVNIIDQVRTDGRTY--EYHHHGHAEFGR 19
G V + H G+P + G ++ I VR G + E HHHG E GR
Sbjct: 436 GAVAEEVVH--GVPGIEGGQHAGIAGDVRQSGGGHGQEPHHHGRPEEGR 482
>UniRef50_A2WP06 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 248
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 99 NVNIIDQVRTDGRTYEYHH-HGHAEFGRQHVP 7
+ +I V T+++HH HGH FGR H P
Sbjct: 131 DATVIHMVHDYPYTHDHHHGHGHHLFGRDHWP 162
>UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1513
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 282 AGSSNGYLPXRSPLSXVDATVPTPXGLRGGEHTSS 178
AG +G +P + A +P P GL G+H SS
Sbjct: 232 AGLGDGTAVQMTPEGEIKAEIPKPPGLNDGDHVSS 266
>UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1512
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 282 AGSSNGYLPXRSPLSXVDATVPTPXGLRGGEHTSS 178
AG +G +P + A +P P GL G+H SS
Sbjct: 232 AGLGDGSAVQMTPEGEIKAEIPKPPGLNDGDHVSS 266
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,497,563
Number of Sequences: 1657284
Number of extensions: 5725611
Number of successful extensions: 13852
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 13296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13815
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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