Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060062.seq
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   0.34 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   2.4  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   4.2  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   4.2  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   4.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   7.3  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         21   9.6  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    21   9.6  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 144 LLAHAVGLPRVLGHRNVNIIDQVRTDGRTYEYHHHGHA 31
           +  H V +P +     V ++D+V+ +  ++ +H HGHA
Sbjct: 609 MCTHKVDIP-LNAIVEVVLVDEVQQENLSHPFHLHGHA 645


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 93   NIIDQVRTDGRTYEY 49
            N+ID+   DG TYEY
Sbjct: 1933 NLIDKRTPDGGTYEY 1947


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = +2

Query: 80  WSMMF--TFLCPRTRGSPTA*ARRLVTKPXL 166
           WSM    T  CPRTR S     R   + P L
Sbjct: 26  WSMASNRTVRCPRTRRSEAVMTRSTPSSPRL 56


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -1

Query: 144 LLAHAVGLPRVLGHRNVNIIDQVRTDGRTYEYHHHGHA 31
           +  H V +P +     V ++D+V+    ++ +H HG+A
Sbjct: 609 MCTHKVDIP-LNAIVEVVLVDEVQQPNLSHPFHLHGYA 645


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 209 QGFVGANIRPVPHDSA 162
           +GF+   ++PVP D+A
Sbjct: 62  EGFISVPVKPVPIDTA 77


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 129 VGLPRVLGHRNVNIIDQVRTDGRTYEYHHHGH 34
           V  P+V+ + N+N    V +  +  +  HH H
Sbjct: 757 VDAPQVISYNNMNNRRIVPSPNQQQQQQHHHH 788


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 54  EYHHHGHAE 28
           ++HHH HAE
Sbjct: 656 QHHHHHHAE 664


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 54  EYHHHGHAEFGRQHVP 7
           +YH +GH   G  H P
Sbjct: 363 DYHQNGHVMLGYIHDP 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,671
Number of Sequences: 2352
Number of extensions: 5274
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)