Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060062.seq
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 72 4e-13
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 72 4e-13
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 72 4e-13
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 72 4e-13
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 72 4e-13
BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746... 31 1.2
AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens ... 31 1.2
BC073999-1|AAH73999.1| 587|Homo sapiens gamma-glutamyltransfera... 29 3.7
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDMVNFVHTNLRKNNRQPYAVSELAGHQTRAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHANLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 45 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 88
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 84 GRAVARIPRVRGGGTHR 100
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 64 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTXAESWGTGRMFA 195
PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGR A
Sbjct: 31 PIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVA 74
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 9 GRAVXRIPRVRGGGTHR 59
GRAV RIPRVRGGGTHR
Sbjct: 70 GRAVARIPRVRGGGTHR 86
>BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746
protein.
Length = 644
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 75 GPGQ*CSRFYVQELEAALLREQGGWSPNQX*IMGYWTYVRPHEALXELXPS 227
GPGQ +RF+ + QG P+Q ++G RP + EL P+
Sbjct: 312 GPGQ-ATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARPERDMGELSPA 361
>AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ46378 fis, clone TESTI4052775. ).
Length = 459
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 75 GPGQ*CSRFYVQELEAALLREQGGWSPNQX*IMGYWTYVRPHEALXELXPS 227
GPGQ +RF+ + QG P+Q ++G RP + EL P+
Sbjct: 127 GPGQ-ATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARPERDMGELSPA 176
>BC073999-1|AAH73999.1| 587|Homo sapiens
gamma-glutamyltransferase-like activity 1 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 164 LNHGVLDVCSPPRSPXGVGTVASTXDSGERXG 259
LN+ +LD+C R P G GT S SG+R G
Sbjct: 424 LNNELLDLCE--RCPRGSGTTPSPAVSGDRVG 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,391,226
Number of Sequences: 237096
Number of extensions: 920852
Number of successful extensions: 2230
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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