Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060060.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.1  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   6.8  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   6.8  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.0  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +3

Query: 48  EVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMRV 167
           E+H    +  + H  +++ +S S ++ +SCIER++  M++
Sbjct: 122 ELHTYTKDRNNVHAPIKK-MSVSILSALSCIERELLTMKL 160


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  IIYNYYAKYNEVHDVYGESYHHHRIVQEYL 107
           + Y+Y  +Y  + + +  S  +HR  +EYL
Sbjct: 97  LYYDYPDQYRALRERWDPSGEYHRRFEEYL 126


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  IIYNYYAKYNEVHDVYGESYHHHRIVQEYL 107
           + Y+Y  +Y  + + +  S  +HR  +EYL
Sbjct: 97  LYYDYPDQYRALRERWDPSGEYHRRFEEYL 126


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 60  VYGESYHHHRIV 95
           +YG SYH H++V
Sbjct: 208 MYGPSYHRHQLV 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,799
Number of Sequences: 2352
Number of extensions: 13725
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)