Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060057.seq
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.33 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 148 KDVKLENGNAPGASNGTSSKSEDNALS 228
           K VK  NGN    S+ + S SE+N+ S
Sbjct: 392 KHVKTHNGNGKKGSSDSCSDSEENSQS 418


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 261 GDPKSDGKAITLSQSDKWMKQAKVIXGKKITTTDTAIHFKKLKSVKLGID 410
           GDP      +TL   D W++  + +  + I T +    F  +K    G+D
Sbjct: 21  GDPTERDLIVTLDDRDLWLR-FECLTNEMIVTKNGRRMFPVVKVTAAGLD 69


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 276 DGKAITLSQSDKWMKQAKVIXGKKITTTDTAIH-FKKLKSVKLGIDDYQKFLDDLAKNKK 452
           D + + L+ S + ++Q K++   +       +  F++L   K   D Y+KF +  +KN K
Sbjct: 379 DSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELAEDK---DGYKKFYEQFSKNIK 435

Query: 453 VELDE 467
           + + E
Sbjct: 436 LGIHE 440


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 482 QLLLNFVKFHFFVLREII*KLLVVVDAEFYRFEFFEVNSRVRCCYFLSXNN 330
           Q ++ F+K+HFF   ++  +L       F  F   EV   V+ CY L   N
Sbjct: 81  QFIVRFMKYHFFGTLKLWSQL-------FSTFAGIEVLHVVKQCYHLQKIN 124


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 440 REII*KLLVVVDAEFYRFE 384
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 440 REII*KLLVVVDAEFYRFE 384
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 440 REII*KLLVVVDAEFYRFE 384
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 440 REII*KLLVVVDAEFYRFE 384
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -1

Query: 316 IHLSLCESVMAFPSDLGSPNLKTP*RLP*KIRRYP 212
           +H++LC  ++  P+D        P  L   + RYP
Sbjct: 4   LHITLCAFLILTPTDQRVVTRTIPSFLRDDVERYP 38


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 541 GRRSIDRHEQIY 576
           GR+ + +H+QIY
Sbjct: 23  GRKKLSKHQQIY 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,353
Number of Sequences: 336
Number of extensions: 2954
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)