Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060056.seq
(728 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 63 3e-12
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 30 0.017
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 23 2.5
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 23 3.3
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 23 3.3
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 3.3
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 22 5.8
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 22 5.8
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 22 5.8
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 7.7
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 7.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 62.9 bits (146), Expect = 3e-12
Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = +3
Query: 63 YLVLDEADRMLDMGFEPQIRKIIE-QIRP---DRQTLMWSATWPKEVKKLAEDYLGDYIQ 230
Y VLDEADRMLDMGF + +++ Q P +RQTLM+SAT+P+EV++LA +L +YI
Sbjct: 312 YFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMFSATFPEEVQQLAGKFLLNYIF 371
Query: 231 INIG 242
I +G
Sbjct: 372 IAVG 375
Score = 55.2 bits (127), Expect = 5e-10
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
+LVAT VAARGLD+ +++VIN+D P S ++Y+HRIG
Sbjct: 462 VLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIG 498
Score = 54.8 bits (126), Expect = 7e-10
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +2
Query: 302 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 481
+K +KL +L++ P +T+IFVETKR A+ ++ + + +HGD+ Q ER+
Sbjct: 395 DKRSKLVSILEKA-----PNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSERE 449
Query: 482 EVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTS 661
+ L FK G +GRTGR +KG +
Sbjct: 450 KALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKA 509
Query: 662 YAFFTPSNSRQ-AKDLVSVLQEA 727
+FF R A DL +L +A
Sbjct: 510 TSFFDEDQDRNLASDLAKILSQA 532
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 149 QTDFDVVSYLAQRSKETC*GLLGRLHSDQYRIITTSANHNILQIVDIC-QEHEK 307
+T F V + + +R +L +L+ ++YR + + QIVDIC + H+K
Sbjct: 469 ETQFVVANIILRRRFALINSILRKLYKNKYRKLIVDGKKSEEQIVDICIRSHDK 522
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 622 YDGCNPPTNLDNQNLLH 572
Y+G N NLDN L+H
Sbjct: 358 YEGPNSENNLDNFYLIH 374
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
IFV+++ I N+ W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
IFV+++ I N+ W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
IFV+++ I N+ W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 622 YDGCNPPTNLDNQNLLH 572
Y G N NLDN L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 622 YDGCNPPTNLDNQNLLH 572
Y G N NLDN L+H
Sbjct: 358 YGGPNSENNLDNFYLIH 374
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 622 YDGCNPPTNLDNQNLLH 572
Y G N NLDN L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -1
Query: 392 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 306
SW + K F +++ F++ + + +YF+
Sbjct: 419 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 447
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -1
Query: 392 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 306
SW + K F +++ F++ + + +YF+
Sbjct: 426 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 454
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,384
Number of Sequences: 336
Number of extensions: 4198
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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