Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060056.seq
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 128 6e-31
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 93 5e-20
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 79 5e-16
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 70 3e-13
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 60 2e-10
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 59 6e-10
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 58 2e-09
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 57 3e-09
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 53 5e-08
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 53 5e-08
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 52 6e-08
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 52 6e-08
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 52 6e-08
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 52 6e-08
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 52 8e-08
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 51 1e-07
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 49 6e-07
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 48 1e-06
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 46 4e-06
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 44 2e-05
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 42 7e-05
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 42 9e-05
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 40 5e-04
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 32 0.096
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 32 0.096
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 30 0.29
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 29 0.90
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 27 2.1
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 2.7
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.7
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 27 3.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.3
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 6.3
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 26 6.3
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 26 6.3
SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|... 25 8.4
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 128 bits (310), Expect = 6e-31
Identities = 57/71 (80%), Positives = 66/71 (92%)
Frame = +3
Query: 42 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 221
TNL+R TYLVLDEADRMLDMGFEPQIRKI++QIRPDRQT+M+SATWPKEV++LA DYL D
Sbjct: 265 TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLND 324
Query: 222 YIQINIGSLQL 254
YIQ+ +GSL L
Sbjct: 325 YIQVTVGSLDL 335
Score = 104 bits (249), Expect = 1e-23
Identities = 56/158 (35%), Positives = 88/158 (55%)
Frame = +2
Query: 254 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 433
+A+HNI QIV++ +K +L ++E+ + ++ K +IF TKR A++I+R +R+ G
Sbjct: 336 AASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDN--KVLIFTGTKRVADDITRFLRQDG 393
Query: 434 WPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXT 613
WPA+ +HGDK Q ERD VL +F+ G
Sbjct: 394 WPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDY 453
Query: 614 SIVLGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA 727
+GRTGR+ +KGT+Y +FT N++QA++LVS+L EA
Sbjct: 454 VHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEA 491
Score = 61.3 bits (142), Expect = 1e-10
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
I+VATDVA+RG+DV GI +V N+D+P ++EDY+HRIG
Sbjct: 422 IMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIG 458
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 92.7 bits (220), Expect = 5e-20
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +3
Query: 36 QATNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 215
+ TNL RCTYLVLDEADRM D+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA L
Sbjct: 562 RVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVL 621
Query: 216 GDYIQINIG 242
++I +G
Sbjct: 622 KKPVEITVG 630
Score = 56.0 bits (129), Expect = 5e-09
Identities = 35/149 (23%), Positives = 64/149 (42%)
Frame = +2
Query: 275 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 454
QIV++ E K ++L LL E+ +Q +T++FV+ + A+ + ++ + G+ + +H
Sbjct: 641 QIVEVRPEESKFSRLLELLGELYNNQLD-VRTLVFVDRQESADALLSDLMKRGYTSNSIH 699
Query: 455 GDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIVLGRT 634
G K Q +RD + +K G + +GRT
Sbjct: 700 GGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRT 759
Query: 635 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQ 721
GR+ G + F TP + A D+ L+
Sbjct: 760 GRAGHTGVAVTFITPEQEKYAVDIAKALK 788
Score = 55.2 bits (127), Expect = 9e-09
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
+L+AT V ARGLDV ++ V+N+D PN EDY+HR+G
Sbjct: 721 VLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVG 757
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 79.4 bits (187), Expect = 5e-16
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = +3
Query: 45 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEDY 212
+L +LVLDEADRMLDMGFEPQIR I+E +RQTLM+SAT+P++++ LA D+
Sbjct: 326 SLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDF 385
Query: 213 LGDYIQINIG 242
L DY+ +++G
Sbjct: 386 LKDYVFLSVG 395
Score = 73.3 bits (172), Expect = 3e-14
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Frame = +2
Query: 254 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 433
S + NI Q V ++ EK + L +L + P T+IFVETKR A+ ++ +
Sbjct: 399 STSENITQKVVHVEDSEKRSYLLDILHTL----PPEGLTLIFVETKRMADTLTDYLLNSN 454
Query: 434 WPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXT 613
+PA +HGD+TQ+ER+ L F+ G + N+
Sbjct: 455 FPATSIHGDRTQRERERALELFRSG--RTSIMVATAVASRGLDIPNVTHVINYDLPTDID 512
Query: 614 SIV--LGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA 727
V +GRTGR+ + G + AFF +N AK+L+ +LQEA
Sbjct: 513 DYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEA 552
Score = 56.0 bits (129), Expect = 5e-09
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 436 ASCLYAWR*NSTRKR*SSVSVQGRCASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 615
A+ ++ R R+R + GR SI+VAT VA+RGLD+ + +VIN+D P +DY+
Sbjct: 457 ATSIHGDRTQRERERALELFRSGR-TSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYV 515
Query: 616 HRIG 627
HRIG
Sbjct: 516 HRIG 519
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 70.1 bits (164), Expect = 3e-13
Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Frame = +3
Query: 63 YLVLDEADRMLDMGFEPQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEDYLGDY 224
YLVLDEADRMLD GFE IR II PD RQT+ +SATWP+ V+ LA +L D
Sbjct: 312 YLVLDEADRMLDTGFEQDIRNIISH-TPDPTRNGSRQTVFFSATWPESVRALAATFLKDP 370
Query: 225 IQINIGSLQL 254
++I IGS +L
Sbjct: 371 VKITIGSDEL 380
Score = 67.3 bits (157), Expect = 2e-12
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Frame = +2
Query: 254 SANHNILQIVDICQE-HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 430
+A+ NI QIV+I + KE L+ LL++ S K +IFV K++A + + R
Sbjct: 381 AASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK 440
Query: 431 GWPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXX 610
+ V +HGD +Q R + L FK G +
Sbjct: 441 -YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIED 499
Query: 611 TSIVLGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA 727
+GRTGR+ +KGT+ FFTP + A +LV+VL++A
Sbjct: 500 YVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQA 538
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +1
Query: 502 GRCASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFLYP 678
G+C +LVATDVAARGLD+ ++ VIN +P + EDY+HRIG K I F P
Sbjct: 465 GKCP-VLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTP 522
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 472 RKR*SSVS-VQGRCASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
R+R +S+ + A ILVATDVA+RGLD+ ++ VINFD P +DYIHR+G
Sbjct: 295 RERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVG 347
Score = 35.5 bits (78), Expect = 0.008
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 48 LQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKL 200
L+R +LV+DEADR+L F + + DRQTL+++AT +++L
Sbjct: 151 LRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQL 203
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 59.3 bits (137), Expect = 6e-10
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 19/86 (22%)
Frame = +3
Query: 48 LQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD-------------------RQTLMWS 170
L +CTY+V+DEADRMLDMGFE + KI+ + RQT+M+S
Sbjct: 397 LSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFS 456
Query: 171 ATWPKEVKKLAEDYLGDYIQINIGSL 248
AT P V LA+ YL + + + IG++
Sbjct: 457 ATLPPRVANLAKSYLIEPVMLTIGNI 482
Score = 56.4 bits (130), Expect = 4e-09
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 430 WLASCLYAWR*NSTRKR*SSVSVQGRCASILVATDVAARGLDVDGIKYVINFDYPNSSED 609
W A L+ + R+R + ++ + A ILVATD+A RG+D+ + V+N++ S ED
Sbjct: 541 WHAVTLHGSKSQEQRER-AIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIED 599
Query: 610 YIHRIGENWTFKIKRNIICFLYP 678
Y HRIG I FL P
Sbjct: 600 YTHRIGRTGRAGKSGTAITFLGP 622
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/133 (24%), Positives = 56/133 (42%)
Frame = +2
Query: 329 LQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 508
++EI +S IIFV KR E I++ + GW AV +HG K+Q++R+ + Q +
Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNK 565
Query: 509 XXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTSYAFFTPSNS 688
++ + +GRTGR+ GT+ F P ++
Sbjct: 566 TADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDT 625
Query: 689 RQAKDLVSVLQEA 727
DL +L +
Sbjct: 626 DVYYDLRVLLSRS 638
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 57.6 bits (133), Expect = 2e-09
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +3
Query: 45 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 224
+L+ YL++DEADR+LDM F P I KI++ I +R+TL++SAT +V+KL L
Sbjct: 186 SLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQP 245
Query: 225 IQINIGS 245
+++ + S
Sbjct: 246 VRVAVSS 252
Score = 53.6 bits (123), Expect = 3e-08
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 514 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
S LVATDVAARGLD+ + VIN+D P S+ YIHR+G
Sbjct: 337 STLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVG 374
Score = 33.1 bits (72), Expect = 0.042
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 359 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 508
G IIF T + ++ +R G+ A+ +HG +Q R L +FK G
Sbjct: 285 GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSG 334
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 56.8 bits (131), Expect = 3e-09
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
+L+ATD+ ARG+D G+K VINFD+P S YIHRIG
Sbjct: 341 VLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIG 377
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/135 (20%), Positives = 55/135 (40%)
Frame = +2
Query: 323 VLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFK 502
V+L+++ + E + +IFV+ +A+ + + +HG+ Q +R+E L +F+
Sbjct: 276 VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFR 335
Query: 503 EGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTSYAFFTPS 682
+G M +GRTGR+ + G + FFT
Sbjct: 336 KGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKE 395
Query: 683 NSRQAKDLVSVLQEA 727
+ K + V++ +
Sbjct: 396 DGEYIKLIAGVMRSS 410
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 45 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEDYLGD 221
+ ++ + V+DEADR+ + GF Q I+ ++SAT P V++LA+ D
Sbjct: 186 SFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVD 245
Query: 222 YIQINIG 242
I+I +G
Sbjct: 246 PIRIIVG 252
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 52.8 bits (121), Expect = 5e-08
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +1
Query: 502 GRCASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
G+C + L+ATDVA+RG+D+ GI+ VIN++ P + E Y+HR+G
Sbjct: 553 GKC-NYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVG 593
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +3
Query: 36 QATNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 200
Q ++ +V+DEADRML+ GF ++ +II+ RQT+++SAT +V L
Sbjct: 399 QGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDL 453
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 52.8 bits (121), Expect = 5e-08
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFL 672
+L+ TD+ ARG+DV + VIN+D P + E+YIHRIG + F K I F+
Sbjct: 313 VLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFV 364
Score = 45.6 bits (103), Expect = 7e-06
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 GRSRTSGSPG-----LQATNLQ--RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 161
G+ SG+PG ++ NL+ L+LDEAD +L+ GF+ QI I + P Q +
Sbjct: 139 GQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVV 198
Query: 162 MWSATWPKEVKKLAEDYLGDYIQI 233
+ SAT P++V ++ + + ++I
Sbjct: 199 VVSATLPQDVLEMTNKFTTNPVRI 222
Score = 42.7 bits (96), Expect = 5e-05
Identities = 24/114 (21%), Positives = 47/114 (41%)
Frame = +2
Query: 365 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXX 544
+ +IF ++RK + ++ +R + MHG+ Q+ERD ++ F++G
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 545 XXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTSYAFFTPSNSRQAKDL 706
++ +GR+GR KG + F T + R +D+
Sbjct: 322 RGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICF 669
I VATDV RG+D++ + VIN+D P+S + Y+HR+G F K I F
Sbjct: 348 ICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITF 398
Score = 44.4 bits (100), Expect = 2e-05
Identities = 36/154 (23%), Positives = 63/154 (40%)
Frame = +2
Query: 263 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 442
H + Q +E K K+N LL + +Q +IFV++ +A + R +R +P+
Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPS 322
Query: 443 VCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIV 622
+C+HG Q+ER + FK+ N+
Sbjct: 323 ICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHR 382
Query: 623 LGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQE 724
+GR GR +KG + F S+S + ++ +QE
Sbjct: 383 VGRAGRFGTKGLAITF---SSSEEDSQILDKIQE 413
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 502 GRCASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFL 672
G C + LV +D+ RG+D+ + VINFD+P ++E Y+HRIG + F + I F+
Sbjct: 330 GVCRN-LVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFI 385
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 30 GLQATNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAED 209
G + CT V+DEAD++L F P I +++ +RQ ++SAT+P VK +
Sbjct: 178 GKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDK 237
Query: 210 YLGDYIQINI-GSLQLPQITTFF 275
+L +IN+ L L +T ++
Sbjct: 238 HLNKPYEINLMDELTLRGVTQYY 260
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 52.4 bits (120), Expect = 6e-08
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFL 672
IL+ TD+ ARG+DV + VIN+D P + E+YIHRIG F K I F+
Sbjct: 311 ILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFV 362
Score = 48.4 bits (110), Expect = 1e-06
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 69 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI--G 242
VLDEAD ML GF+ QI I + + P Q ++ SAT P++V ++ ++ D I+I +
Sbjct: 166 VLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKD 225
Query: 243 SLQLPQITTFF 275
L L I F+
Sbjct: 226 ELTLEGIKQFY 236
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/114 (21%), Positives = 45/114 (39%)
Frame = +2
Query: 365 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXX 544
+ +IF T+RK + ++ + + MHGD Q +RD ++++F+ G
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 545 XXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTSYAFFTPSNSRQAKDL 706
++ +GR GR KG S F T + R +++
Sbjct: 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 52.4 bits (120), Expect = 6e-08
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFLYP 678
IL+ TDVAARGLD+ + V+ +D P S++DY+HRIG I FL P
Sbjct: 499 ILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLHRIGRTARAGHNGAAIMFLLP 552
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Frame = +3
Query: 36 QATNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR------------PDRQ-TLMWSAT 176
+A ++ + ++VLDE DR++DMGFE + KI+ + P R+ T++ SAT
Sbjct: 288 EALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSAT 347
Query: 177 WPKEVKKLAEDYLGDYIQI 233
VK+L++ L D + +
Sbjct: 348 MKDTVKRLSDSALKDALYL 366
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 52.0 bits (119), Expect = 8e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 48 LQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 227
L Y+V DEADR+ +MGF Q+ +I+ + RQTL++SAT P+ + A+ L D +
Sbjct: 211 LSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPV 270
Query: 228 QINI 239
+ +
Sbjct: 271 LVRL 274
Score = 45.6 bits (103), Expect = 7e-06
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 514 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
++LV TDVA+RG+D+ + VIN+D+P + ++HR+G
Sbjct: 398 NLLVVTDVASRGIDIPLLANVINYDFPPQPKVFVHRVG 435
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 51.2 bits (117), Expect = 1e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 66 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 203
L+LDEADR+LDMGF + I+ + RQT+++SAT K VK LA
Sbjct: 189 LILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLA 234
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGENWTFKIKRNIICFLYP 678
+L TD+ ARGLD + +VI D P + YIHR+G + N + L P
Sbjct: 338 VLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLP 391
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 49.2 bits (112), Expect = 6e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
IL+ T+VAARGLD+ + +++ +D P+ DYIHR+G
Sbjct: 389 ILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVG 425
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/47 (48%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = +3
Query: 66 LVLDEADRMLDMGFEPQIRKIIEQI-RPDRQTLMWSATWPKEVKKLA 203
LV+DEADR+L++GFE ++R+I++ + +RQTL++SAT +V+ LA
Sbjct: 240 LVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLA 286
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +2
Query: 365 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 499
K I+F+ + + ++ + P + +HG + QQ R ++F
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEF 382
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 466 STRKR*SSVSVQGRCAS-ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
+T +R S +C S IL ATDV ARG+D I V+ P++++DYIHRIG
Sbjct: 328 TTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIG 382
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 69 VLDEADRMLDMGFEPQIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEDYLG-DYIQIN 236
+LDEADR++DMGF I I E + + + L +SAT P +V + LG D+ IN
Sbjct: 193 ILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSATMPPKVSNVFRGILGTDFKLIN 250
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 46.4 bits (105), Expect = 4e-06
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
+LV TDVAARG+D+ + +VI++ P++++ Y+HR G
Sbjct: 442 VLVCTDVAARGIDIPSVTHVIHYHVPHTADMYVHRSG 478
Score = 33.9 bits (74), Expect = 0.024
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 45 NLQRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQTLMWSATWPKEVKK 197
N ++ LVLDEADR+L ++ K++E + RQT ++SAT+ + +++
Sbjct: 265 NFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDEGLQQ 319
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 44.4 bits (100), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 514 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
++LV +D+ ARG+DV + VIN+D P S Y+HRIG
Sbjct: 489 NLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIG 526
Score = 34.3 bits (75), Expect = 0.018
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 36 QATNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 140
++ +LQ Y+V+DEADR+LD F+ + ++ +I
Sbjct: 279 ESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEI 313
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 42.3 bits (95), Expect = 7e-05
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 66 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 176
L+LDEAD ++DMGF+ ++ II Q+ R+T ++SAT
Sbjct: 158 LILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFSAT 194
Score = 38.7 bits (86), Expect = 8e-04
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 514 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
++L TD+A+RGLD+ + +V+ D P + + HR G
Sbjct: 311 TVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCG 348
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 41.9 bits (94), Expect = 9e-05
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 541 ARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
ARGLD + + V+NFD P++++ YIHRIG
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIG 415
Score = 35.9 bits (79), Expect = 0.006
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 48 LQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 200
L + +LV+DEAD ML G+ ++ + + Q+ + SAT K + L
Sbjct: 162 LDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIASL 212
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +1
Query: 511 ASILVATDVAARGLDVDGIKYVINFDYP------NSSEDYIHRIGENWTF 642
+ +LV T+V ARG+DV + V+N+D P + Y+HRIG F
Sbjct: 403 SKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRF 452
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 224 HSDQYRIITTSAN-HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKA 400
++++ R+ T + I Q+ CQ +E+K NVL++ G ++IIF + K A
Sbjct: 310 NANEIRLKTEELSVEGIKQLYMDCQS--EEHKYNVLVELYGLLTI--GQSIIFCKKKDTA 365
Query: 401 ENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 508
E I+R + G C+ G+ +RD ++ F+ G
Sbjct: 366 EEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVG 401
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 VLDEADRMLD-MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 245
VLDEAD MLD G Q +I + + Q +++SAT+ + V+K AE + + +I + +
Sbjct: 259 VLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKYAERFAPNANEIRLKT 318
Query: 246 LQL 254
+L
Sbjct: 319 EEL 321
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 31.9 bits (69), Expect = 0.096
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
I++AT G++ G++ V+++ P SS DY+ G
Sbjct: 1474 IMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETG 1510
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 31.9 bits (69), Expect = 0.096
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
I++AT G++ G++ V+++ P SS DY+ G
Sbjct: 1474 IMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETG 1510
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
I+VAT G+D +++VI+ +P S E Y G
Sbjct: 796 IIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETG 832
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 28.7 bits (61), Expect = 0.90
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 514 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
++L+AT VA G+DV VI F+ + Y+ G
Sbjct: 425 NVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRG 462
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVINFDY 591
++VAT++A L V GI YV++ Y
Sbjct: 761 VVVATNIAETSLTVHGISYVVDTGY 785
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 27.1 bits (57), Expect = 2.7
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -3
Query: 687 EFEGVKKAYDVPFDFERPVLPNTMDVILR-RIWI-IKIYYIFDTIN-IKPSSCNISCYKN 517
E GV KAYD+PF + T + LR RIW ++ ++ TIN S I
Sbjct: 792 EKNGVNKAYDLPF-YCVGFKSATPEYTLRTRIWASLRTQTLYRTINGFSNYSRAIKLLYR 850
Query: 516 TSTPSL 499
T TP L
Sbjct: 851 TETPEL 856
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.1 bits (57), Expect = 2.7
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVIN 582
+++AT++A L +DGI YV++
Sbjct: 781 VVIATNIAETSLTIDGIYYVVD 802
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 520 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
LVAT + GLD+ +I +D +S I R+G
Sbjct: 535 LVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMG 570
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = +1
Query: 523 VATDVAARGLDVDGIKYVINFDYPNSSED------YIHRIGENWTFKIKRNIICFLYPFK 684
V D A L +D I +++ + P S+ Y+HR +N +I I P K
Sbjct: 1451 VLYDAWAFQLIMDDINHLLRKENPKGSQSMLKFISYLHRYNKNVDLEIWSKIFLGFKPSK 1510
Query: 685 FP 690
FP
Sbjct: 1511 FP 1512
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 6.3
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +1
Query: 517 ILVATDVAARGLDVDGIKYVIN 582
++++T++A L +DGI YV++
Sbjct: 354 VVISTNIAETSLTIDGIVYVVD 375
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 129 IEQIRPDRQTLMWSATWPKEVKKLAED 209
I + R +R TL S +P+E K L+ED
Sbjct: 268 IRKKRSERDTLNVSTEFPEETKDLSED 294
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 520 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
L+AT + GLD+ + +I +D S + R+G
Sbjct: 496 LIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMG 531
>SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase
Gpd3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 401 QLFSWFQQKLLFSHQVLDFVQFLA 330
+L SW+ + +SH+V+D V + A
Sbjct: 309 KLVSWYDNEWGYSHRVVDLVAYTA 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,142,531
Number of Sequences: 5004
Number of extensions: 66823
Number of successful extensions: 285
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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