Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060056.seq
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    65   2e-12
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.7  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   9.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 65.3 bits (152), Expect = 2e-12
 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
 Frame = +3

Query: 51  QRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLG 218
           +   ++VLDEADRMLDMGF P I K++       +  RQTLM+SAT+P E+++LA  +L 
Sbjct: 322 ENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLH 381

Query: 219 DYIQINIG 242
           +YI + +G
Sbjct: 382 NYICVFVG 389



 Score = 65.3 bits (152), Expect = 2e-12
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
 Frame = +2

Query: 245 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 424
           I   A  ++ Q + + ++ +K  KL    +EI     P   T++FVETKR A+ ++  + 
Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-TLVFVETKRNADYLASLMS 444

Query: 425 RYGWPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXX 604
              +P   +HGD+ Q+ER+  LY FK G                    N           
Sbjct: 445 ETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSI 504

Query: 605 XXTSIVLGRTGRSKSKGTSYAFFTPSNSR-QAKDLVSVLQEA 727
                 +GRTGR  +KG + +F+ P   R  A DLV +L +A
Sbjct: 505 DDYVHRIGRTGRVGNKGRATSFYDPEADRAMASDLVKILTQA 546



 Score = 56.4 bits (130), Expect = 8e-10
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +1

Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
           +L+AT VAARGLD+  + +V+N+D P S +DY+HRIG
Sbjct: 476 VLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIG 512


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 615 PSYWGELDVQNQKEHHMLSLPL 680
           PSYW +  +  +K+H  L   L
Sbjct: 397 PSYWKQKKLPTKKQHKQLQAQL 418


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 70  FLMRLIVCWIWDLNHKSEK 126
           F+  +  CW WDL  K  K
Sbjct: 515 FVRYMNSCWCWDLEKKFPK 533


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 PDRQTLMWSATWPKEVKKLAEDYLGDY 224
           P+R+ ++W A   ++++   E YLG +
Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 PDRQTLMWSATWPKEVKKLAEDYLGDY 224
           P+R+ ++W A   ++++   E YLG +
Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,160
Number of Sequences: 2352
Number of extensions: 17240
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)