BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060056.seq (728 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 65 2e-12 CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 9.7 AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 23 9.7 AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 9.7 AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 9.7 >AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein protein. Length = 596 Score = 65.3 bits (152), Expect = 2e-12 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%) Frame = +3 Query: 51 QRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLG 218 + ++VLDEADRMLDMGF P I K++ + RQTLM+SAT+P E+++LA +L Sbjct: 322 ENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLH 381 Query: 219 DYIQINIG 242 +YI + +G Sbjct: 382 NYICVFVG 389 Score = 65.3 bits (152), Expect = 2e-12 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 1/162 (0%) Frame = +2 Query: 245 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 424 I A ++ Q + + ++ +K KL +EI P T++FVETKR A+ ++ + Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-TLVFVETKRNADYLASLMS 444 Query: 425 RYGWPAVCMHGDKTQQERDEVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXX 604 +P +HGD+ Q+ER+ LY FK G N Sbjct: 445 ETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSI 504 Query: 605 XXTSIVLGRTGRSKSKGTSYAFFTPSNSR-QAKDLVSVLQEA 727 +GRTGR +KG + +F+ P R A DLV +L +A Sbjct: 505 DDYVHRIGRTGRVGNKGRATSFYDPEADRAMASDLVKILTQA 546 Score = 56.4 bits (130), Expect = 8e-10 Identities = 21/37 (56%), Positives = 30/37 (81%) Frame = +1 Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627 +L+AT VAARGLD+ + +V+N+D P S +DY+HRIG Sbjct: 476 VLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIG 512 >CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal structural protein protein. Length = 1645 Score = 23.0 bits (47), Expect = 9.7 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = +3 Query: 615 PSYWGELDVQNQKEHHMLSLPL 680 PSYW + + +K+H L L Sbjct: 397 PSYWKQKKLPTKKQHKQLQAQL 418 >AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein protein. Length = 814 Score = 23.0 bits (47), Expect = 9.7 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +1 Query: 70 FLMRLIVCWIWDLNHKSEK 126 F+ + CW WDL K K Sbjct: 515 FVRYMNSCWCWDLEKKFPK 533 >AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr phosphatase protein. Length = 1977 Score = 23.0 bits (47), Expect = 9.7 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = +3 Query: 144 PDRQTLMWSATWPKEVKKLAEDYLGDY 224 P+R+ ++W A ++++ E YLG + Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585 >AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr phosphatase protein. Length = 1978 Score = 23.0 bits (47), Expect = 9.7 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = +3 Query: 144 PDRQTLMWSATWPKEVKKLAEDYLGDY 224 P+R+ ++W A ++++ E YLG + Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 775,160 Number of Sequences: 2352 Number of extensions: 17240 Number of successful extensions: 31 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 30 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 74428737 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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