Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060055.seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   7.3  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 258 GVT*NTSTKWRARQRQTAPVFH 323
           G+  +T  KW+ R++   P FH
Sbjct: 121 GLLTSTGLKWQTRRKILTPAFH 142


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 258 GVT*NTSTKWRARQRQTAPVFH 323
           G+  +T  KW+ R++   P FH
Sbjct: 121 GLLTSTGLKWQTRRKILTPAFH 142


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 285 WRARQRQTAPVFHCGATVVRFELMED 362
           WR  + + +PVF  G   + F LM++
Sbjct: 123 WRNLRTKLSPVFTSGKMKLMFPLMQE 148


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 338 GALRAYGGRSPFSC 379
           G +R + G  PFSC
Sbjct: 25  GHIRTHTGEKPFSC 38


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 377 KKTVTVLHKLEAHH 336
           K T+T++H  + HH
Sbjct: 83  KDTITIIHIYDLHH 96


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 258 GVT*NTSTKWRARQRQTAPVFH 323
           G+  +   KW+ R++   P FH
Sbjct: 114 GLLTSAGPKWQNRRKILTPAFH 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,301
Number of Sequences: 336
Number of extensions: 3264
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)