Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060053.seq
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 125 1e-28
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 125 1e-28
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 125 1e-28
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 125 1e-28
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 123 5e-28
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 33 0.64
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 31 2.6
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 31 2.6
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 31 2.6
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 31 4.5
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 31 4.5
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 4.5
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 4.5
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 31 4.5
AF504925-1|AAM28881.1| 381|Homo sapiens basic helix-loop-helix ... 30 7.8
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 38.3 bits (85), Expect = 0.022
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV +GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 74.5 bits (175), Expect = 3e-13
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2
Query: 77 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 158 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 186
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 198
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 125 bits (302), Expect = 1e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 43.2 bits (97), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE++PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 39.1 bits (87), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ P P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 123 bits (297), Expect = 5e-28
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 76.2 bits (179), Expect = 9e-14
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 459 SVAATGVPALVQARGHILKRFPSFPWL*PTKSKXXXXXXXXXXXXXXLKAWSDILXVY 632
++AA+ +PALV ++GH ++ FP P + K + LKAW+DI VY
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
IE+ PELPLVV DKV+ KTK+AV+ LK
Sbjct: 144 IEEFPELPLVVEDKVEGYKKTKEAVLLLK 172
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.5 bits (73), Expect = 0.64
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 288 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 452
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 453 GGSVAATGVPA 485
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
HH + H T+ H HGH G H +P H G H H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
HH + H T+ H HGH G H +P H G H H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDHLLAH 242
HH + H T+ H HGH G H +P H G H H
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCH 409
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>AF504925-1|AAM28881.1| 381|Homo sapiens basic helix-loop-helix
protein 5 protein.
Length = 381
Score = 29.9 bits (64), Expect = 7.8
Identities = 26/91 (28%), Positives = 33/91 (36%)
Frame = +1
Query: 112 FREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGGHQTSAESWGTG 291
FR G S APP R + A S C E LL GGG SA S G G
Sbjct: 35 FRSTPPGMDLSLAPPPRERPASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGG 94
Query: 292 RAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 384
+P + G G + ++ G +
Sbjct: 95 GGGVGVPGLLVGSAGVGGDPSLSSLPAGAAL 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,204,299
Number of Sequences: 237096
Number of extensions: 2095935
Number of successful extensions: 6111
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6031
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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