Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021991
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      27   0.19 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   5.4  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   5.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   5.4  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    22   5.4  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   5.4  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   7.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -2

Query: 590 LPGAAARSSFNHRVWSSVKPPSAILNMTCDVXXXXXXXXXPEQRHRRRPPFSPL 429
           LP A      +H +  ++ PP      TCDV           +RH+ +  F PL
Sbjct: 348 LPSAILAMRLSHPLHGNLLPPGVCY--TCDVCGKTLSTKLTLKRHKEQQHFQPL 399


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 639 FRPTASSRVFGARF 598
           FR T SS++FG+RF
Sbjct: 285 FRTTKSSKMFGSRF 298


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 641 RHARIRSLAGHTKRPAIRDH*RAIQDGRRQR 733
           RH  +++   H +  A++DH R  Q  ++Q+
Sbjct: 140 RHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQ 170



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 676  KTTCDSRSLTSHSRWTSAKELPR 744
            K+ CDS+ +  HS   + ++ P+
Sbjct: 1484 KSACDSKLIVDHSSQKTQQQQPQ 1506


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  +  G+
Sbjct: 121 IINIEQIPVPVPVYYGN 137


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  +  G+
Sbjct: 121 IINIEQIPVPVPVYYGN 137


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 117 IINIEQIPVPVPIYCGN 133


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 113 IINIEQIPVPVPIYCGN 129


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 110 IINIEQIPVPVPIYCGN 126


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  +  G+
Sbjct: 121 IINIEQIPVPVPVYYGN 137


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 338 IINIEQIPVPVPIYCGN 354


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  I  G+
Sbjct: 351 IINIEQIPVPVPIYCGN 367


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  +  G+
Sbjct: 346 IINIEQIPVPVPVYYGN 362


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 754 ILNLEEVPLPTSILNGS 704
           I+N+E++P+P  +  G+
Sbjct: 340 IINIEQIPVPVPVYCGN 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,876
Number of Sequences: 438
Number of extensions: 2280
Number of successful extensions: 27
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)