Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021989
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006146-1|AAH06146.1|  358|Homo sapiens programmed cell death 2...    42   0.003
S78085-1|AAB34865.1|  344|Homo sapiens PDCD2 protein.                  40   0.006
BC008378-1|AAH08378.1|  344|Homo sapiens programmed cell death 2...    40   0.006
AY948416-1|AAX51225.1|  311|Homo sapiens programmed cell death 2...    40   0.006
AL031259-2|CAA20285.1|  344|Homo sapiens programmed cell death 2...    40   0.006
BC039832-1|AAH39832.1|  258|Homo sapiens periphilin 1 protein.         30   8.3  
BC025306-1|AAH25306.1|  458|Homo sapiens Unknown (protein for IM...    30   8.3  
AY157850-1|AAO16497.1|  374|Homo sapiens periphilin 1 protein.         30   8.3  
AY039238-1|AAK68657.1|  458|Homo sapiens gastric cancer antigen ...    30   8.3  
AK055690-1|BAB70985.1|  367|Homo sapiens protein ( Homo sapiens ...    30   8.3  

>BC006146-1|AAH06146.1|  358|Homo sapiens programmed cell death
           2-like protein.
          Length = 358

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 24/74 (32%), Positives = 37/74 (50%)
 Frame = +3

Query: 15  GDRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICEL 194
           GD+ F+ F+ R+     QILRYS    P+   +  +S   + P+    C +CG + I E 
Sbjct: 246 GDQTFYKFMKRIAACQEQILRYSWSGEPLF-LTCPTSEVTELPA----CSQCGGQRIFEF 300

Query: 195 QLVPEFAEALRLPN 236
           QL+P     L+  N
Sbjct: 301 QLMPALVSMLKSAN 314



 Score = 31.9 bits (69), Expect = 2.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 251 SLHFLSVLIFTCSLSCWQPN 310
           S+ F ++L++TC  SCW PN
Sbjct: 318 SVEFGTILVYTCEKSCWPPN 337


>S78085-1|AAB34865.1|  344|Homo sapiens PDCD2 protein.
          Length = 344

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +3

Query: 18  DRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICELQ 197
           D++F  F +++   P QILRY R   PI    IS    P    +P  C  CG++ I E Q
Sbjct: 238 DKIFQKFKTQIALEPEQILRYGRGIAPIW---ISGENIPQEKDIPD-CP-CGAKRILEFQ 292

Query: 198 LVPEFAEALR 227
           ++P+    L+
Sbjct: 293 VMPQLLNYLK 302


>BC008378-1|AAH08378.1|  344|Homo sapiens programmed cell death 2
           protein.
          Length = 344

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +3

Query: 18  DRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICELQ 197
           D++F  F +++   P QILRY R   PI    IS    P    +P  C  CG++ I E Q
Sbjct: 238 DKIFQKFKTQIALEPEQILRYGRGIAPIW---ISGENIPQEKDIPD-CP-CGAKRILEFQ 292

Query: 198 LVPEFAEALR 227
           ++P+    L+
Sbjct: 293 VMPQLLNYLK 302


>AY948416-1|AAX51225.1|  311|Homo sapiens programmed cell death 2
           isoform 1 protein.
          Length = 311

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +3

Query: 18  DRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICELQ 197
           D++F  F +++   P QILRY R   PI    IS    P    +P  C  CG++ I E Q
Sbjct: 205 DKIFQKFKTQIALEPEQILRYGRGIAPIW---ISGENIPQEKDIPD-CP-CGAKRILEFQ 259

Query: 198 LVPEFAEALR 227
           ++P+    L+
Sbjct: 260 VMPQLLNYLK 269


>AL031259-2|CAA20285.1|  344|Homo sapiens programmed cell death 2
           protein.
          Length = 344

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +3

Query: 18  DRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICELQ 197
           D++F  F +++   P QILRY R   PI    IS    P    +P  C  CG++ I E Q
Sbjct: 238 DKIFQKFKTQIALEPEQILRYGRGIAPIW---ISGENIPQEKDIPD-CP-CGAKRILEFQ 292

Query: 198 LVPEFAEALR 227
           ++P+    L+
Sbjct: 293 VMPQLLNYLK 302


>BC039832-1|AAH39832.1|  258|Homo sapiens periphilin 1 protein.
          Length = 258

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  RLRQNPGQILRYSRDEPPILGASISSSGTPDCPS 146
           R ++ P Q L+ SRD  P  G+++SSS   D PS
Sbjct: 141 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 174


>BC025306-1|AAH25306.1|  458|Homo sapiens Unknown (protein for
           IMAGE:4893383) protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  RLRQNPGQILRYSRDEPPILGASISSSGTPDCPS 146
           R ++ P Q L+ SRD  P  G+++SSS   D PS
Sbjct: 158 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 191


>AY157850-1|AAO16497.1|  374|Homo sapiens periphilin 1 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  RLRQNPGQILRYSRDEPPILGASISSSGTPDCPS 146
           R ++ P Q L+ SRD  P  G+++SSS   D PS
Sbjct: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 229


>AY039238-1|AAK68657.1|  458|Homo sapiens gastric cancer antigen
           Ga50 protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  RLRQNPGQILRYSRDEPPILGASISSSGTPDCPS 146
           R ++ P Q L+ SRD  P  G+++SSS   D PS
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 222


>AK055690-1|BAB70985.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31128 fis, clone IMR322000863. ).
          Length = 367

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  RLRQNPGQILRYSRDEPPILGASISSSGTPDCPS 146
           R ++ P Q L+ SRD  P  G+++SSS   D PS
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 222


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,697,404
Number of Sequences: 237096
Number of extensions: 1830567
Number of successful extensions: 7553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7552
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)