Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021979
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   4.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.2  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   7.2  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    23   9.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 225 GGNWRGRWRSDSI 187
           G  WRGRWR +++
Sbjct: 71  GEVWRGRWRGENV 83


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -2

Query: 241  PGQLAGWELEGKVEVRLDWGLASSESVGILHCLQME*LIRETAIGKTLQTVD 86
            P +L    ++ K+     W LA    +  L C ++  L++E A  K  + VD
Sbjct: 1758 PKELEQTLIDAKIPA-CHWNLADLPDIKRLSCAEICQLVKERARAKRREDVD 1808


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 503 TASVRSAITKPMAELQKCPHCAERSAFV 586
           +  VR A  KP AE ++C  C ER   V
Sbjct: 220 SCKVREA-PKPSAESRRCFRCLERGHMV 246


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 472 GGLFSRNGLFSGRPKFFGKYCSKSVP 395
           GG    N    GRP F   YC  + P
Sbjct: 226 GGPAILNNQLVGRPNFIINYCGSASP 251


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 544 FCHWLC 527
           FCHWLC
Sbjct: 848 FCHWLC 853


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,601
Number of Sequences: 2352
Number of extensions: 13677
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)