Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021977
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 134 9e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 100 4e-22
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 95 7e-21
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 95 1e-20
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 92 6e-20
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 9e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 39 6e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 28 1.5
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 27 2.0
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 2.6
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 3.5
SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|... 26 4.6
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 25 8.0
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 134 bits (325), Expect = 9e-33
Identities = 66/119 (55%), Positives = 86/119 (72%)
Frame = +2
Query: 161 NFEKQRNTHSSYLPATWRTI*KQV*GCSWSRLGIDLGTTNSCVAVMEGKTPKVVENSEGS 340
+F+ + H S + A W + +GIDLGTT SC+A+MEG+TPKV+ N+EG+
Sbjct: 22 SFKIGASLHGSRMTARWNSNASGNEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGT 81
Query: 341 RTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRLIXRRFDDPEVQKDMKNLHTK 517
RTTPS VAF+K+GERLVG+ AKRQAV N NTF+ATKRLI RRF +PEVQ+D+K + K
Sbjct: 82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYK 140
Score = 100 bits (240), Expect = 2e-22
Identities = 47/70 (67%), Positives = 54/70 (77%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAY 678
+E YK+V SNGDAW++ GK YSPSQIG F+L KM+ETA YL VK AV+TVPAY
Sbjct: 135 KEVPYKIVEHSNGDAWLEAR-GKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAY 193
Query: 679 FNDSQRQATK 708
FNDSQRQATK
Sbjct: 194 FNDSQRQATK 203
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 99.5 bits (237), Expect = 4e-22
Identities = 49/84 (58%), Positives = 61/84 (72%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCVAV E +++ N +G+RTTPS VAF+ E ERLVG AK QA N N
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFT-ETERLVGDAAKNQAAMNPRN 67
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRLI RR++DPE QKD+K+
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKH 91
Score = 60.5 bits (140), Expect = 2e-10
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1
Query: 565 KVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
K ++ +I A VL KMKE +EA LN V+ AVITVPAYF+DSQR ATK
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATK 161
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 95.5 bits (227), Expect = 7e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRLI R+FDDPEVQ DMK+
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKH 87
Score = 70.5 bits (165), Expect = 2e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +1
Query: 565 KVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
K ++P +I + VL+KM+ETAEAYL V AV+TVPAYFNDSQRQATK
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 94.7 bits (225), Expect = 1e-20
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRLI RRF+DPEVQ DMK+
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKH 87
Score = 67.7 bits (158), Expect = 2e-12
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +1
Query: 565 KVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
K ++P +I + VL+KM+E+AEA+L V AV+TVPAYFNDSQRQATK
Sbjct: 110 KTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 92.3 bits (219), Expect = 6e-20
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCVAVM+ +++ N +G+R TPS+VAF+ E ERLVG AK QA +N N
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFT-EDERLVGEAAKNQAPSNPEN 96
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRLI R+FD+ + KD+K+
Sbjct: 97 TIFDIKRLIGRKFDEKTMAKDIKS 120
Score = 72.1 bits (169), Expect = 7e-14
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 487 AKGHEEFAYKVVRASNGDAWVQGTDGKV--YSPSQIGAFVLIKMKETAEAYLNTSVKYAV 660
AK + F + +V N GK ++P +I A +L KMK+TAEAYL V +AV
Sbjct: 115 AKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAV 174
Query: 661 ITVPAYFNDSQRQATK 708
+TVPAYFND+QRQATK
Sbjct: 175 VTVPAYFNDAQRQATK 190
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.4 bits (135), Expect = 9e-10
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GID G + + +AV + V+ N +R+TPS V++ E R +G AK +N N
Sbjct: 8 VGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYG-ERSRFLGEAAKSAEASNFRN 66
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRL R +DDPE+ KD+++
Sbjct: 67 TVGSLKRLAGRTYDDPEI-KDIES 89
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQA 702
+S Q+ A K+K AEA L SV VI++PA+F D QR+A
Sbjct: 116 FSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRA 159
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.1 bits (87), Expect = 6e-04
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 LGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 430
+GI G NS +A +GKT V+ N EG+R PS +++ + E G+ A+ Q V N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTD-VLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNAD 84
Query: 431 NTFYATKRLIXRRFDD 478
N+ + L+ + D+
Sbjct: 85 NSVTNFRDLLGKSHDE 100
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 565 KVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQA 702
K+ + + L ++ E+AE +L T V V++VP YF D+QR+A
Sbjct: 136 KILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKA 181
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 556 TDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQR 696
+D + YS +I A + AE + + V+TVP +FN+ QR
Sbjct: 130 SDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 611 IFINTNAPIWLGEYTLPSVPCTQASPFEALTTLYANS 501
IF++T LG+Y++P+ C A+P+ + + +S
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPYSGIAEIEVHS 447
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 651 FHTCVQVCFSSFLHFYQHKCTNLARRVYFAISTL 550
F+ V F SF Y KCT A V +AIS L
Sbjct: 387 FYGLDDVIFHSFTRTYGFKCTLSASDVSYAISAL 420
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 120 GLSSDLYTQRNFSSILKSNATPTVPIYQRH 209
GL D + + S I ++ PTVPIY+ H
Sbjct: 65 GLKKDELVENSESYINDASFEPTVPIYESH 94
>SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1
Query: 313 GCLALHDGNARVCRAQIDSKTAPRTPSDLFLNCTPCR 203
GC +HD + R++ S + ++L C CR
Sbjct: 36 GCREIHDNAIEISRSETHSIPGSKGEANLIWTCKNCR 72
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 165 KLTKNFSAYTSLNLIRCTLKPFGRMAPSRSTSLSRIKILY 46
KL K+F +T LNL++C + M ++++ ++ LY
Sbjct: 603 KLNKDFDDFTPLNLLKCV--NYSLMEFQKNSTFDMLEKLY 640
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 8.0
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = -2
Query: 702 GLTLGIIEVSWHCYDCIFHTCVQVCFSSFLHFYQHKCTNLARRVYFAISTLHPGVAIRSP 523
GLT+ ++ +S Y C F + + ++ K + F+I ++ VA
Sbjct: 131 GLTVALLGMS--LYVCGFASG-PILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQ 187
Query: 522 DYFVCKFFMSFCTS 481
+C+FF FC S
Sbjct: 188 TVMICRFFSGFCAS 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,106,643
Number of Sequences: 5004
Number of extensions: 66953
Number of successful extensions: 210
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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