Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021977
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 144 5e-35
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 144 5e-35
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 94 8e-20
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 94 8e-20
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 91 7e-19
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 85 4e-17
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 85 5e-17
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 85 5e-17
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 76 3e-14
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 76 3e-14
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 38 0.009
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 34 0.087
AF067949-2|AAC19235.1| 357|Caenorhabditis elegans Hypothetical ... 29 4.3
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 5.7
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 5.7
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 5.7
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 28 7.5
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 27 9.9
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 144 bits (349), Expect = 5e-35
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG PAKRQAVTNS N
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSAN 93
Query: 434 TFYATKRLIXRRFDDPEVQKDMK 502
T +ATKRLI RR++DPEVQKD+K
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLK 116
Score = 106 bits (254), Expect = 2e-23
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = +1
Query: 511 YKVVRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDS 690
YK+V+ASNGDAWV+ GK Y PSQ+GAFVL+KMKETAE+YL T+V V+TVPAYFNDS
Sbjct: 120 YKIVKASNGDAWVEA-QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDS 178
Query: 691 QRQATK 708
QRQATK
Sbjct: 179 QRQATK 184
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 144 bits (349), Expect = 5e-35
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG PAKRQAVTNS N
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSAN 93
Query: 434 TFYATKRLIXRRFDDPEVQKDMK 502
T +ATKRLI RR++DPEVQKD+K
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLK 116
Score = 112 bits (270), Expect = 2e-25
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +1
Query: 511 YKVVRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDS 690
YK+V+ASNGDAWV+ GKVYSPSQ+GAFVL+KMKETAE+YL T+V AV+TVPAYFNDS
Sbjct: 120 YKIVKASNGDAWVEA-QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDS 178
Query: 691 QRQATK 708
QRQATK
Sbjct: 179 QRQATK 184
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 94.3 bits (224), Expect = 8e-20
Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +2
Query: 254 LGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 430
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 431 NTFYATKRLIXRRFDDPEVQKDMKNLHTK*SGLRMATPGCKV 556
NT + KRLI R+FDDP VQ DMK+ K A P +V
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQGT---DGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITV 669
+ + +KV+ A VQ + K+++P +I + VL+KMKETAEA+L T+VK AV+TV
Sbjct: 88 KHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTV 147
Query: 670 PAYFNDSQRQATK 708
PAYFNDSQRQATK
Sbjct: 148 PAYFNDSQRQATK 160
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 94.3 bits (224), Expect = 8e-20
Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +2
Query: 254 LGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 430
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 431 NTFYATKRLIXRRFDDPEVQKDMKNLHTK*SGLRMATPGCKV 556
NT + KRLI R+FDDP VQ DMK+ K A P +V
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQGT---DGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITV 669
+ + +KV+ A VQ + K+++P +I + VL+KMK+TAEA+L +VK AV+TV
Sbjct: 88 KHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTV 147
Query: 670 PAYFNDSQRQATK 708
P YFNDSQRQATK
Sbjct: 148 PTYFNDSQRQATK 160
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 91.5 bits (217), Expect = 5e-19
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 434 TFYATKRLIXRRFDDPEVQKDMKN 505
T + KRLI RRFD+ VQ D+K+
Sbjct: 66 TVFDAKRLIGRRFDEETVQSDIKH 89
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
++ +I A VL KMKETAEA L SV+ AVITVPAYFNDSQRQATK
Sbjct: 114 FNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATK 159
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 242 SWSRLGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 421
S +GIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA
Sbjct: 3 SCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAAR 61
Query: 422 NSGNTFYATKRLIXRRFDDPEVQKDMKN 505
N NT + KRLI RRFD+ VQ D K+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKH 89
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
++P +I A VL KMKETAE YL +VK AVITVPAYFNDSQRQATK
Sbjct: 114 FNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK 159
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 242 SWSRLGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 421
S +GIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA
Sbjct: 3 SCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAAR 61
Query: 422 NSGNTFYATKRLIXRRFDDPEVQKDMKN 505
N NT + KRLI RRFD+ VQ D K+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKH 89
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
++P +I A VL KMKETAE YL +VK AVITVPAYFNDSQRQATK
Sbjct: 114 FNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK 159
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 85.4 bits (202), Expect = 4e-17
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSG 430
+GIDLGTT SCV V + +++ N +G+R TPS+VAFS +GERL+G AK Q N
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 431 NTFYATKRLIXRRFDDPEVQKDMKN 505
NT + KRLI R +++ VQ+D+K+
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKH 117
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +1
Query: 499 EEFAYKVVRASNG-DAWVQ-GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVP 672
+ + +K+V SN + V+ G++ K ++P ++ A VL KMK+ AE+YL VK AV+TVP
Sbjct: 116 KHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVP 175
Query: 673 AYFNDSQRQATK 708
AYFND+Q+QATK
Sbjct: 176 AYFNDAQKQATK 187
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSG 430
+GIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G AK Q N
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 431 NTFYATKRLIXRRFDDPEVQKDMKN 505
NT + KRLI R ++D VQ D+K+
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKH 120
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQ--GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVP 672
+ + +KV+ SN + G+D K ++P ++ A VL+KMKE AE+YL VK AV+TVP
Sbjct: 119 KHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVP 178
Query: 673 AYFNDSQRQATK 708
AYFND+QRQATK
Sbjct: 179 AYFNDAQRQATK 190
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSG 430
+GIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G AK Q N
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 431 NTFYATKRLIXRRFDDPEVQKDMKN 505
NT + KRLI R ++D VQ D+K+
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKH 120
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQ--GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVP 672
+ + +KV+ SN + G+D K ++P ++ A VL+KMKE AE+YL VK AV+TVP
Sbjct: 119 KHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVP 178
Query: 673 AYFNDSQRQATK 708
AYFND+QRQATK
Sbjct: 179 AYFNDAQRQATK 190
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 434 TFYATKRLIXRRFDDPEVQKDM 499
+ + KR+I RR+DD +Q+DM
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDM 83
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
+S + + +L +K AE L VK AVITVPAYFN +QR+AT+
Sbjct: 111 FSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATE 156
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +2
Query: 254 LGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 433
+GIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 434 TFYATKRLIXRRFDDPEVQKDM 499
+ + KR+I RR+DD +Q+DM
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDM 83
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQATK 708
+S + + +L +K AE L VK AVITVPAYFN +QR+AT+
Sbjct: 111 FSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATE 156
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 248 SRLGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 427
S LG D+G N + V +V+ N TP+ V+F + +R +G+ A++ TN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 428 GNTFYATKRLIXRRFDDPEVQK 493
NT K LI R+F DP Q+
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQR 82
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +1
Query: 514 KVVRASNGDAWVQGT---DGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYA--VITVPAY 678
KVV+ N D VQ + + ++P Q+ A +L K++ E+ L+ K + V+ VP+Y
Sbjct: 90 KVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSY 149
Query: 679 FNDSQRQA 702
F D QR+A
Sbjct: 150 FTDVQRRA 157
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 GIDLGTTNSCVAVMEGKTPK--VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 430
GIDLGTT S + + T + ++ + G ++ PS VAF G L+G A Q N
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 431 NTFYATKRLIXRRFD 475
T Y KR I R F+
Sbjct: 97 RTIYDAKRFIGRNFE 111
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 499 EEFAYKVVRASNGDAWVQ---GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKYAVITV 669
+ + +K+ S G A+ + + K P +IG+ ++ +K A +L ++ VI+
Sbjct: 122 KRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISC 181
Query: 670 PAYFNDSQRQAT 705
PA FN+ QR T
Sbjct: 182 PAEFNEKQRNFT 193
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQA 702
Y+ + A +L K+ EAY + +VK VITVP + N ++R+A
Sbjct: 120 YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRA 163
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 571 YSPSQIGAFVLIKMKETAEAYLNTSVKYAVITVPAYFNDSQRQA 702
Y+ + A +L K+ EAY + +VK VITVP + N ++R+A
Sbjct: 136 YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRA 179
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 562 GKVYSPSQIGAFVLIKMKETAEAYLNTS-VKYAVITVPAYFNDSQRQATK 708
G+ Y+ + A +L K+ E Y + +K VITVP YF ++R A +
Sbjct: 132 GESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVE 181
>AF067949-2|AAC19235.1| 357|Caenorhabditis elegans Hypothetical
protein T10H9.1 protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 678 VSWHCYDCIFHTCVQVCFSSFLHFYQHKCTNLARRVYFAISTLHPGVAIRSPDY-FVCKF 502
V W D +F F + +H + A +YF +ST+ GV + + F+CK
Sbjct: 145 VLWGLGDMVFLIFEDDIFMTRIHCVTTSSSGPAFHLYFLLSTIFFGVLLSLAYFLFICKL 204
Query: 501 FM 496
F+
Sbjct: 205 FV 206
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 305 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 427
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 216 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 256
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 305 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 427
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 229 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 269
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 305 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 427
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 217 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 257
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -2
Query: 654 IFHTCVQVCFSSFLHFYQHKCTNLA-RRVYFAISTLHPGVAIRSPDYFV--C-KFFMS 493
IFH CF S L Y T LA R + F+ + G A R D+ V C +F+M+
Sbjct: 49 IFHPMFSFCFFSLLLLYYSSTTFLAIRNITFSFYGENYGKAPRIADHVVINCERFYMA 106
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 87 GPFGRKALECTGLSSDLYTQRNFSSILKSNATPTVPIYQ 203
GPFGR EC D+ + SS +++ TP VP+ +
Sbjct: 468 GPFGRLWSECENSDEDVADEEAESS--EASVTPPVPVLE 504
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 397 HSDQTLALFREGHMGGSRPRAFTVFHHLGCLALHDGNARV 278
H+ + A+F EG+ GG +H GC+ + N V
Sbjct: 19 HAIEQYAVFDEGNRGGFTSDVVAFDYHNGCVVIGSKNGEV 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,375,622
Number of Sequences: 27780
Number of extensions: 387911
Number of successful extensions: 1162
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -