Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021976
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase f... 163 3e-40
D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of c... 163 3e-40
DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase... 163 3e-40
BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase... 163 3e-40
AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase... 163 3e-40
AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase... 163 3e-40
BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein. 96 7e-20
BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein. 96 7e-20
BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein. 96 7e-20
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 32 1.4
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 32 1.8
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 32 1.8
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.8
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.8
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.8
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.8
BC065741-1|AAH65741.1| 343|Homo sapiens RNA pseudouridylate syn... 29 9.5
BC062362-1|AAH62362.1| 328|Homo sapiens RPUSD3 protein protein. 29 9.5
BC032135-1|AAH32135.1| 343|Homo sapiens RNA pseudouridylate syn... 29 9.5
>L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 76 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 135
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 136 QDAIHYMTEQAPAAVVELENYGMPFS 161
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 166 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 193
>D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of
complex II protein.
Length = 664
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 76 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 135
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 136 QDAIHYMTEQAPAAVVELENYGMPFS 161
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 166 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 193
>DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase
complex subunit A protein.
Length = 550
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 11 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 70
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 71 QDAIHYMTEQAPAAVVELENYGMPFS 96
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 101 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 128
>BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein (Fp) protein.
Length = 664
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 76 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 135
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 136 QDAIHYMTEQAPAAVVELENYGMPFS 161
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 166 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 193
>AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 76 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 135
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 136 QDAIHYMTEQAPAAVVELENYGMPFS 161
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 166 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 193
>AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein precursor variant
protein.
Length = 670
Score = 163 bits (397), Expect = 3e-40
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGD 429
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGD
Sbjct: 82 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 141
Query: 430 QDAIHYMTKEAPHAVIELDNYGMPFS 507
QDAIHYMT++AP AV+EL+NYGMPFS
Sbjct: 142 QDAIHYMTEQAPAAVVELENYGMPFS 167
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGGQSLKFGKGGQAHRCC VA
Sbjct: 172 GKIYQRAFGGQSLKFGKGGQAHRCCCVA 199
>BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein.
Length = 144
Score = 96.3 bits (229), Expect = 7e-20
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = +1
Query: 364 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFS 507
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NYGMPFS
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFS 48
Score = 62.1 bits (144), Expect = 1e-09
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGG SLKFGKGGQAHRCC VA
Sbjct: 53 GKIYQRAFGGHSLKFGKGGQAHRCCCVA 80
>BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein.
Length = 148
Score = 96.3 bits (229), Expect = 7e-20
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = +1
Query: 364 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFS 507
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NYGMPFS
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFS 48
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/28 (89%), Positives = 25/28 (89%)
Frame = +2
Query: 518 GKIYQRAFGGQSLKFGKGGQAHRCCAVA 601
GKIYQRAFGG SLKFGKG QAHRCC VA
Sbjct: 53 GKIYQRAFGGHSLKFGKGRQAHRCCCVA 80
>BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein.
Length = 519
Score = 96.3 bits (229), Expect = 7e-20
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +1
Query: 250 SSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKG 411
++FGL + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDT G
Sbjct: 76 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTSTG 129
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G + K + A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG---KIEKKTWFESRDFCRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 202 PQT*CISYWGWWSRTSSSFGLVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSW 381
P+ C WG SRTS F L +G K T F +R A GG A++ N EE
Sbjct: 642 PEPKCPEDWGASSRTSLCFKLYAKG-KHEKKT-WFESRDF-CRALGGDLASINNKEEQQT 698
Query: 382 LWHMYDTVKGS----DWLG 426
+W + T GS WLG
Sbjct: 699 IWRLI-TASGSYHKLFWLG 716
>BC065741-1|AAH65741.1| 343|Homo sapiens RNA pseudouridylate
synthase domain containing 3 protein.
Length = 343
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 487 NYGMPFSPPRRKDLPEGLRRTVSQVRKGRTSS 582
N +P P RKD+ EG+++T+S R T S
Sbjct: 191 NLTVPVKAPSRKDILEGVKKTLSHFRVVATGS 222
>BC062362-1|AAH62362.1| 328|Homo sapiens RPUSD3 protein protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 487 NYGMPFSPPRRKDLPEGLRRTVSQVRKGRTSS 582
N +P P RKD+ EG+++T+S R T S
Sbjct: 176 NLTVPVKAPSRKDILEGVKKTLSHFRVVATGS 207
>BC032135-1|AAH32135.1| 343|Homo sapiens RNA pseudouridylate
synthase domain containing 3 protein.
Length = 343
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 487 NYGMPFSPPRRKDLPEGLRRTVSQVRKGRTSS 582
N +P P RKD+ EG+++T+S R T S
Sbjct: 191 NLTVPVKAPSRKDILEGVKKTLSHFRVVATGS 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,524,715
Number of Sequences: 237096
Number of extensions: 2081672
Number of successful extensions: 11391
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11390
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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