Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021975
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot... 31 1.6
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro... 31 1.6
AE014297-1924|AAF55118.1| 868|Drosophila melanogaster CG3837-PA... 31 1.6
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P... 31 1.6
BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p pro... 30 2.8
AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p pro... 30 2.8
AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB... 30 2.8
AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA... 30 2.8
AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-P... 29 3.8
M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clo... 29 5.0
M30114-2|AAA28752.1| 1122|Drosophila melanogaster biological clo... 29 5.0
M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clo... 29 5.0
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 29 5.0
AL024485-6|CAA19680.1| 1055|Drosophila melanogaster EG:155E2.4,F... 29 5.0
AL024485-5|CAA19679.1| 1116|Drosophila melanogaster EG:155E2.4,F... 29 5.0
AL024485-4|CAA19678.1| 1212|Drosophila melanogaster EG:155E2.4,F... 29 5.0
AF251241-1|AAG44573.1| 244|Drosophila melanogaster period protein. 29 5.0
AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA ... 29 5.0
AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH0878... 29 6.6
AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB... 29 6.6
AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA... 29 6.6
AB029224-1|BAB15898.1| 183|Drosophila melanogaster period protein. 28 8.7
AB029223-1|BAB15897.1| 183|Drosophila melanogaster period protein. 28 8.7
AB029222-1|BAB15896.1| 183|Drosophila melanogaster period protein. 28 8.7
>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 protein.
Length = 1309
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 268 SRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
SRS GAG+P ASSP A S+ P + S + TT
Sbjct: 1189 SRSPSTGAGSPPASSPKATSSTSPKIQRRRSTSKPPTT 1226
>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p protein.
Length = 1322
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 268 SRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
SRS GAG+P ASSP A S+ P + S + TT
Sbjct: 1196 SRSPSTGAGSPPASSPKATSSTSPKIQRRRSTSKPPTT 1233
>AE014297-1924|AAF55118.1| 868|Drosophila melanogaster CG3837-PA
protein.
Length = 868
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 484 RPQLQCVLCGQVSETFRATFNFCNKC-SFNKRQSEP 380
RPQ QC LCG +S F N +C + N Q P
Sbjct: 187 RPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRP 222
>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
protein.
Length = 1322
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 268 SRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
SRS GAG+P ASSP A S+ P + S + TT
Sbjct: 1196 SRSPSTGAGSPPASSPKATSSTSPKIQRRRSTSKPPTT 1233
>BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p
protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 271 QSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIR 167
+S W PG P P LLP ++ TE+++R
Sbjct: 720 ESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLR 754
>AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p
protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 271 QSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIR 167
+S W PG P P LLP ++ TE+++R
Sbjct: 720 ESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLR 754
>AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB,
isoform B protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 271 QSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIR 167
+S W PG P P LLP ++ TE+++R
Sbjct: 720 ESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLR 754
>AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA,
isoform A protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 271 QSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIR 167
+S W PG P P LLP ++ TE+++R
Sbjct: 720 ESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLR 754
>AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-PA
protein.
Length = 1284
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 289 AEQRRGQSRSWRPGAGTPSASSPNAGSTLLPSHTKTES 176
A+Q+R Q +++ +PS+++P + S L P H S
Sbjct: 910 AQQQRQQKSTYKYATSSPSSTNPGSSSGLAPVHNPGSS 947
>M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clock
protein C protein.
Length = 1176
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 735 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 769
>M30114-2|AAA28752.1| 1122|Drosophila melanogaster biological clock
protein B protein.
Length = 1122
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 735 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 769
>M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clock
protein A protein.
Length = 1218
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 735 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 769
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 667 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 701
>AL024485-6|CAA19680.1| 1055|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1055
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 729 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 763
>AL024485-5|CAA19679.1| 1116|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1116
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 729 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 763
>AL024485-4|CAA19678.1| 1212|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1212
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 729 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 763
>AF251241-1|AAG44573.1| 244|Drosophila melanogaster period protein.
Length = 244
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 53 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 87
>AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA
protein.
Length = 1218
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 274 GQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFI 170
G G GT +ASS GS +P T TES +
Sbjct: 735 GTGNGTNSGTGTGTASSSKGGSAAIPPVTLTESLL 769
>AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH08789
protein.
Length = 499
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 298 AVRAEQRRGQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
AV AE + + W+ G S S NA S+ S + SF+ + +T
Sbjct: 286 AVSAEISKLERNCWKDEPGNDSVRSSNASSSSATSSSSGASFVTAAST 333
>AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB,
isoform B protein.
Length = 499
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 298 AVRAEQRRGQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
AV AE + + W+ G S S NA S+ S + SF+ + +T
Sbjct: 286 AVSAEISKLERNCWKDEPGNDSVRSSNASSSSATSSSSGASFVTAAST 333
>AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA,
isoform A protein.
Length = 908
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 298 AVRAEQRRGQSRSWRPGAGTPSASSPNAGSTLLPSHTKTESFIRSVTT 155
AV AE + + W+ G S S NA S+ S + SF+ + +T
Sbjct: 695 AVSAEISKLERNCWKDEPGNDSVRSSNASSSSATSSSSGASFVTAAST 742
>AB029224-1|BAB15898.1| 183|Drosophila melanogaster period protein.
Length = 183
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 250 GAGTPSASSPNAGSTLLPSHTKTESFI 170
G GT +ASS GS +P T TES +
Sbjct: 6 GTGTGTASSSKGGSAAIPPVTLTESLL 32
>AB029223-1|BAB15897.1| 183|Drosophila melanogaster period protein.
Length = 183
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 250 GAGTPSASSPNAGSTLLPSHTKTESFI 170
G GT +ASS GS +P T TES +
Sbjct: 6 GTGTGTASSSKGGSAAIPPVTLTESLL 32
>AB029222-1|BAB15896.1| 183|Drosophila melanogaster period protein.
Length = 183
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 250 GAGTPSASSPNAGSTLLPSHTKTESFI 170
G GT +ASS GS +P T TES +
Sbjct: 6 GTGTGTASSSKGGSAAIPPVTLTESLL 32
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,459,303
Number of Sequences: 53049
Number of extensions: 453707
Number of successful extensions: 1761
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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