Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021972
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical pr...    29   2.8  
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    29   3.7  
AF106591-5|AAK71394.1|  637|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    29   3.7  
AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z81129-1|CAB03408.1|  350|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z68299-4|CAD60422.2|  367|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm rece...    28   8.7  

>Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical
           protein T19B10.5 protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +2

Query: 506 SVNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAK 676
           SV+ S  +KEMR   + R+ + T    V   P+   + PTS  T P + ++TD+  K
Sbjct: 323 SVSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQK 376


>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +3

Query: 252 YYHRIEINIH----QFRFCIHNRFIASLPDIRLHRTHCL*HKGIENI 380
           + H  EI  H         + +RF+  + D  LHR HCL    +E I
Sbjct: 843 FLHNSEIRSHGRLKSSNCVVDSRFVLKVTDFGLHRLHCLEEINLEEI 889


>AF106591-5|AAK71394.1|  637|Caenorhabditis elegans Hypothetical
           protein T01A4.1b protein.
          Length = 637

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +3

Query: 252 YYHRIEINIH----QFRFCIHNRFIASLPDIRLHRTHCL*HKGIENI 380
           + H  EI  H         + +RF+  + D  LHR HCL    +E I
Sbjct: 216 FLHNSEIRSHGRLKSSNCVVDSRFVLKVTDFGLHRLHCLEEINLEEI 262


>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
           protein T01A4.1a protein.
          Length = 1217

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +3

Query: 252 YYHRIEINIH----QFRFCIHNRFIASLPDIRLHRTHCL*HKGIENI 380
           + H  EI  H         + +RF+  + D  LHR HCL    +E I
Sbjct: 784 FLHNSEIRSHGRLKSSNCVVDSRFVLKVTDFGLHRLHCLEEINLEEI 830


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +3

Query: 252 YYHRIEINIH----QFRFCIHNRFIASLPDIRLHRTHCL*HKGIENI 380
           + H  EI  H         + +RF+  + D  LHR HCL    +E I
Sbjct: 843 FLHNSEIRSHGRLKSSNCVVDSRFVLKVTDFGLHRLHCLEEINLEEI 889


>AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical
           protein Y39G8B.4 protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 115 LILFSSISLFRKILRYIFKENFLSIAFRKSFIL*INFAYCRLFLSNITTELKLTSINFDF 294
           LI+F S   F  I   +F  N+LS  F  S I   N     L L +     K+T I+ D+
Sbjct: 176 LIIFFS-QTFTMIFSIVFFFNYLSYVFGISIIAISNIGAVMLMLYSRHYNQKITKIHEDY 234

Query: 295 A 297
           A
Sbjct: 235 A 235


>Z81129-1|CAB03408.1|  350|Caenorhabditis elegans Hypothetical
           protein T23F1.3 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 67  TIFEISGALLKFIHYFLILFSSISL 141
           TI+  SG LL ++HY +ILF  + +
Sbjct: 200 TIYLFSGVLLIWLHYSIILFCGLKM 224


>Z68299-4|CAD60422.2|  367|Caenorhabditis elegans Hypothetical
           protein T04B2.7 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 776 GGEDAVLVLGDSPSIDTEPPGSSRPPAMSTSNMTS 672
           GG +   V GDS   D  PPG+  P   S  ++ S
Sbjct: 24  GGNEKTAVTGDSHEDDKPPPGNQSPNDKSRESVFS 58


>AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm
           receptor protein 208 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 107 IIF*YYFQVYHYFAKFCVIFSRRIFYQSPLENHLYYKLILRTVDYFYLILPP 262
           +IF + F+ Y    KF  I S +  +   L+N L+Y L+ +T+   +L+  P
Sbjct: 218 VIFYFGFKCYTSLQKFKEIESSK--HIQNLQNQLFYSLVAQTLIPLFLVHTP 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,477,305
Number of Sequences: 27780
Number of extensions: 376479
Number of successful extensions: 1254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)