Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021969
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.31
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.31
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 31 0.96
U41549-3|AAA83283.2| 245|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81514-5|CAB04192.2| 611|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 6.7
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical
protein T14D7.2 protein.
Length = 734
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 753 IYFWFMSTLFMHLFFYWNMTFFYFGDCTIYSFIKVSHIHELLIQSP 616
IYF LF+H F +T+F+ CT+ S + +I LL+ SP
Sbjct: 666 IYFNTQIPLFIHCFVQLLITYFFAIICTMVSELPALNIERLLLASP 711
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKY 202
+E S EDK + +I +E ++ LE+ + R D++KA +++ D KVA
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079
Query: 203 DEVAQ 217
DE+ +
Sbjct: 1080 DEITK 1084
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKY 202
+E S EDK + +I +E ++ LE+ + R D++KA +++ D KVA
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079
Query: 203 DEVAQ 217
DE+ +
Sbjct: 1080 DEITK 1084
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -1
Query: 545 SSCYLKVKTRLSSSFNSCLGVTSGYKSSKIFKSSSVNLAAPFVPFMKSVLASALPICIRQ 366
SS + V S N CL + +S+IF N+ AP + + S ++ A+ ICIR
Sbjct: 129 SSNFFSVAITFLMSLNRCLSFGAKPLNSRIF--DGANVVAPVLLALSSSISCAV-ICIRS 185
Query: 365 SRISK 351
S I +
Sbjct: 186 SSIER 190
>U41549-3|AAA83283.2| 245|Caenorhabditis elegans Hypothetical
protein F22F1.3 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 9 QLLMQNLKSRPLRRIRIHQFDKL 77
+LL N KSR RRIRIH DKL
Sbjct: 127 RLLKPNAKSRITRRIRIHVIDKL 149
>Z81514-5|CAB04192.2| 611|Caenorhabditis elegans Hypothetical
protein F26F2.6 protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/39 (23%), Positives = 23/39 (58%)
Frame = +3
Query: 528 LQITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHEC 644
L + + + +IDG+P +++ +T +++K+ V +C
Sbjct: 14 LAAQKGPSYKFGVIDGEPIDLINSTSVQVKDFDECVEKC 52
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +2
Query: 17 NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 196
NAK + E+K T I++ ++ + ++ K +L + ++ +EL S QK
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424
Query: 197 KYDEVAQTLEFARDLSKQ 250
K E+ + L+ A+ S +
Sbjct: 425 KIQELEKELQNAQKRSSE 442
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +2
Query: 17 NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 196
NAK + E+K T I++ ++ + ++ K +L + ++ +EL S QK
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424
Query: 197 KYDEVAQTLEFARDLSKQ 250
K E+ + L+ A+ S +
Sbjct: 425 KIQELEKELQNAQKRSSE 442
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 8 SAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGK 163
S+ S PAS+ D DT +R+I +E +++ ++ + + +R + G+
Sbjct: 9 SSRAMSSASPASASDSDTSVRKIGKALETYLKHSQQHVAMMEKHRAEFETGR 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,901,509
Number of Sequences: 27780
Number of extensions: 297543
Number of successful extensions: 882
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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