Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021967X
(472 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 180 7e-48
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 180 7e-48
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 31 0.006
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 27 0.13
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 27 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.54
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.54
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 2.9
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 3.8
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 6.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 8.8
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 180 bits (438), Expect = 7e-48
Identities = 93/139 (66%), Positives = 100/139 (71%)
Frame = +1
Query: 55 VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILGELCEKLREDVINYNCRSLV 234
VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEE+ILGEL EKLREDVINYNCRSLV
Sbjct: 392 VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCRSLV 451
Query: 235 ASVPFFATPIPTLYQMSSPNYAMKYFSPVTLS*RKEQ*GIKCMSSKKAS*IIVMANGEVP 414
ASVPFFA + F P + ++ G K ++ IVMANGEV
Sbjct: 452 ASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGEVA 511
Query: 415 TSLSDGSYFGEICLLRTVR 471
TSLSDGSYFGEICLL R
Sbjct: 512 TSLSDGSYFGEICLLTNAR 530
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 246 FLCNADSNFVSDVVTKLRYEVFQ 314
F C +D+ F+ D+V R + Q
Sbjct: 124 FNCLSDTIFLIDIVVNFRTGIMQ 146
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 180 bits (438), Expect = 7e-48
Identities = 93/139 (66%), Positives = 100/139 (71%)
Frame = +1
Query: 55 VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILGELCEKLREDVINYNCRSLV 234
VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEE+ILGEL EKLREDVINYNCRSLV
Sbjct: 360 VKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCRSLV 419
Query: 235 ASVPFFATPIPTLYQMSSPNYAMKYFSPVTLS*RKEQ*GIKCMSSKKAS*IIVMANGEVP 414
ASVPFFA + F P + ++ G K ++ IVMANGEV
Sbjct: 420 ASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGEVA 479
Query: 415 TSLSDGSYFGEICLLRTVR 471
TSLSDGSYFGEICLL R
Sbjct: 480 TSLSDGSYFGEICLLTNAR 498
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 246 FLCNADSNFVSDVVTKLRYEVFQ 314
F C +D+ F+ D+V R + Q
Sbjct: 124 FNCLSDTIFLIDIVVNFRTGIMQ 146
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 31.1 bits (67), Expect = 0.006
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 309 FQPGDIIIKEGTIGNKMYVIQEGIVDHS 392
F G II+EG +G+ +YV++EG V+ S
Sbjct: 123 FSAGSTIIREGDVGSIVYVMEEGKVEVS 150
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 26.6 bits (56), Expect = 0.13
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 160 EEVILGELCEKLREDVIN-YNC 222
+ V+LG LCEK+ + ++N NC
Sbjct: 405 QRVVLGRLCEKVAKQLVNSVNC 426
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 26.6 bits (56), Expect = 0.13
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 160 EEVILGELCEKLREDVIN-YNC 222
+ V+LG LCEK+ + ++N NC
Sbjct: 443 QRVVLGRLCEKVAKQLVNSVNC 464
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.54
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 412 PTSLSDGSYFGEICLL 459
P+SL+DG+ FG CL+
Sbjct: 421 PSSLADGARFGGSCLI 436
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.54
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 412 PTSLSDGSYFGEICLL 459
P+SL+DG+ FG CL+
Sbjct: 421 PSSLADGARFGGSCLI 436
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 460 LAGRFPRSTNRQI 422
L G FPR+TNR I
Sbjct: 175 LLGCFPRATNRDI 187
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.8 bits (44), Expect = 3.8
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +3
Query: 207 HQLQLSLTCGLCTFLCNADSNFVSDVVTKLRYEVFQPGDIII 332
H LQ TC + + NF D++ K P +++I
Sbjct: 63 HDLQCYTTCIMKLLRTFKNGNFDFDMIVKQLEITMPPEEVVI 104
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.0 bits (42), Expect = 6.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 324 CHRAEILHSVVW*RHLIQSWNRRCK 250
CH A I+H+ V ++++ S N + K
Sbjct: 171 CHNAGIVHADVKPKNILMSKNGQPK 195
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 246 FLCNADSNFVSDVVTKLRYEVFQ 314
F C +D+ F+ D+V R + Q
Sbjct: 124 FNCLSDTIFLIDIVVNFRTGIMQ 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,131
Number of Sequences: 438
Number of extensions: 3161
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -