Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021966
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 55 6e-10
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 25 1.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.3
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 9.3
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 55.2 bits (127), Expect = 6e-10
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 346 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
+V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G++L+A
Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMA 238
Score = 37.1 bits (82), Expect = 2e-04
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A+ +P I + + P ++++PTREL QI Q F
Sbjct: 240 AQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLN 299
Query: 683 SYVRNTCVFGGAPKREQ 733
S ++ +GG Q
Sbjct: 300 SILKTVVAYGGTSVMHQ 316
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 24.6 bits (51), Expect = 1.0
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -1
Query: 575 YLCAQLLARCRPTFCRNPFGYATKFFPDI--AIGQ 477
Y +L A P CR G TK PDI AIGQ
Sbjct: 11 YCTWELNATNSPHTCRTKNGDYTKIMPDILTAIGQ 45
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -2
Query: 244 PIWASHVLPSREFFFP 197
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 625 RQDQSNRTITSPNRRLVIYVHNCW 554
+Q QS +TIT +VI CW
Sbjct: 250 KQVQSRKTITRMLSAVVITFFICW 273
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 465 SSSRLADSYVWKEFSGVAKRVPA 533
S + A +YVWK G ++ P+
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPS 230
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 465 SSSRLADSYVWKEFSGVAKRVPA 533
S + A +YVWK G ++ P+
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPS 230
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 465 SSSRLADSYVWKEFSGVAKRVPA 533
S + A +YVWK G ++ P+
Sbjct: 259 SYEQTAITYVWKNDEGTLRKSPS 281
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 465 SSSRLADSYVWKEFSGVAKRVPA 533
S + A +YVWK G ++ P+
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPS 230
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 78 TGIIAVETVVPNLEEATNSA 137
T + A V P +EE TN+A
Sbjct: 412 TALGAAALVAPGMEEPTNTA 431
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -2
Query: 244 PIWASHVLPSREFFFP 197
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 743 SPGLALF*EHHQTHTCYEHKMCVQNLQQ 660
SP L HHQ HT + H Q Q
Sbjct: 160 SPPLVESQMHHQMHTQHPHMQPQQGQHQ 187
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 304 KRSPYEVEEYRNKHEVTV 357
K P++V+++R+K VT+
Sbjct: 64 KNYPFDVDQWRDKTFVTI 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,140
Number of Sequences: 438
Number of extensions: 4495
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -