Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021964
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 159 8e-39
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 159 1e-38
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 158 2e-38
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 152 1e-36
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 7e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.16
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.16
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 36 0.16
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 36 0.16
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 36 0.16
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 2.0
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 2.0
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 2.0
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 2.0
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 8.0
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 8.0
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 8.0
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 159 bits (386), Expect = 8e-39
Identities = 79/98 (80%), Positives = 85/98 (86%)
Frame = +1
Query: 214 EGPQEIVRR*CPSTRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 393
E P+ + RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 394 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 507
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 102
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 1e-38
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 158 bits (383), Expect = 2e-38
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRK
Sbjct: 80 RLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLRS 163
Score = 136 bits (329), Expect = 6e-32
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 152 bits (368), Expect = 1e-36
Identities = 75/84 (89%), Positives = 78/84 (92%)
Frame = +1
Query: 256 RLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRK 435
RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRK
Sbjct: 80 RLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRK 139
Query: 436 QVVNIPSFIVRLDSGKHIDFSLKS 507
QVVNIPSFIVRLDS KHIDFSL S
Sbjct: 140 QVVNIPSFIVRLDSQKHIDFSLCS 163
Score = 128 bits (310), Expect = 1e-29
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 220
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 221 PKRLFEGNALL 253
P+RLFEGNALL
Sbjct: 68 PRRLFEGNALL 78
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 7e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 50 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 229
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 230 LFE 238
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 331 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 465
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 101 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALL 253
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALL 80
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 331 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 465
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 101 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALL 253
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALL 80
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 331 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 465
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 101 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALL 253
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALL 80
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 331 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 465
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 101 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALL 253
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALL 80
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 331 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 465
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 101 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALL 253
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALL 80
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 239 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 81
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 80 QKDDEVSRTSLKIPTVL 30
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 239 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 81
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 80 QKDDEVSRTSLKIPTVL 30
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 239 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 81
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 80 QKDDEVSRTSLKIPTVL 30
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 239 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 81
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 80 QKDDEVSRTSLKIPTVL 30
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 336 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 476
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 336 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 476
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 336 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 476
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,104,005
Number of Sequences: 237096
Number of extensions: 1888413
Number of successful extensions: 4512
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4511
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -