Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021961
(612 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 129 4e-31
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 63 3e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 52 9e-08
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 41 2e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 33 0.033
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.17
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.40
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomy... 26 3.7
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.9
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 4.9
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 6.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 8.6
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 25 8.6
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 8.6
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 129 bits (311), Expect = 4e-31
Identities = 69/119 (57%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Frame = +2
Query: 257 AAVS*TAVSPIERVKLLLQVQHVS*QIAA-DQRYKGIVDAFFRIPKVQGLLSFWRGNFAN 433
AAVS TA +PIERVKLL+Q Q + RYKGI + F R +G++S WRGN AN
Sbjct: 38 AAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTAN 97
Query: 434 VIRYFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGATSLCFVYPLDFA 610
V+RYFPT ALNFAFKDK+K++F R + +FAGNLAS GAAGA SL FVY LD+A
Sbjct: 98 VLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYA 156
Score = 31.9 bits (69), Expect = 0.075
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = +2
Query: 344 DQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHALNFAFKDKYKQVFLGGLTRRR 523
++++ G+VD + + + GL +RG +V+ L F D K V L G
Sbjct: 172 ERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGN 231
Query: 524 SSAYFAGNLASCGAAGATSLCFVYPLD 604
A F A +G S YPLD
Sbjct: 232 FLASFLLGWAVTTGSGVAS----YPLD 254
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 63.3 bits (147), Expect = 3e-11
Identities = 42/118 (35%), Positives = 60/118 (50%)
Frame = +2
Query: 257 AAVS*TAVSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANV 436
A VS TAVSP+ER+K++ QVQ+ ++ Y + +I +GL+ F+RGN N
Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Query: 437 IRYFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGATSLCFVYPLDFA 610
+R FP A+ FA + KQ L + + + L AGA S YPLD A
Sbjct: 84 LRAFPYGAVQFATFNMLKQRALKNRSHQNLENH--ERLLFGAIAGAASCATTYPLDIA 139
Score = 32.7 bits (71), Expect = 0.043
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 353 YKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHALNF 469
YK I A F I K +G+ F+RG +N+++ P ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 51.6 bits (118), Expect = 9e-08
Identities = 36/114 (31%), Positives = 56/114 (49%)
Frame = +2
Query: 263 VS*TAVSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIR 442
V+ + V+P++RVK+L Q H S + A R+ G+ A I V GL ++G+ A + R
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88
Query: 443 YFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGATSLCFVYPLD 604
FP + F ++ ++V L R A S AG S+ F YPL+
Sbjct: 89 VFPYAGIKFVAYEQVRRV----LIRDPEHETHARRFLSGSLAGTCSVFFTYPLE 138
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/114 (25%), Positives = 57/114 (50%)
Frame = +2
Query: 263 VS*TAVSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIR 442
VS T +P++R+K++L + + + + ++ + G+ SF+ GN NV++
Sbjct: 140 VSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGNGINVLK 198
Query: 443 YFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGATSLCFVYPLD 604
P ++ F + K+V LG + + + LA G AG+ + F+YP+D
Sbjct: 199 VMPESSIKFGTYEAMKRV-LGISSSSENHSPLYSYLAG-GMAGSVAQMFIYPVD 250
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 272 TAVSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFP 451
T V P+ ++ LQ Q S A Y G +D F++ K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTS---AHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 452 THALNFAFKDKYKQ 493
+ A+++ + K+
Sbjct: 408 SVAISYLVYENCKK 421
Score = 26.2 bits (55), Expect = 3.7
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Frame = +2
Query: 278 VSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFR-IPKVQGLLSFWRGNFANVIRYFPT 454
+ P++ +K +Q +S Q K I+ + + + K G+ ++RG ++ FP
Sbjct: 246 IYPVDTLKFRIQCSDLS----RGQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPY 301
Query: 455 HALNFAFKDKYKQVFLGGLTRR-----RSSAYFAGNLASCGA-AGATSLCFVYPLD 604
A + + K+ ++G L R + G + + GA +G+T V+PL+
Sbjct: 302 SATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLN 357
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 37.9 bits (84), Expect = 0.001
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 251 YPAAVS*TAVSPIERVKLL--LQVQHVS*QIAADQR-YKGIVDAFFRIPKVQGLLSFWRG 421
+P + AV+ I V L L V Q++ + Y G D +I K +G +RG
Sbjct: 8 FPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRG 67
Query: 422 NFANVIRYFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGATSLCFVYPL 601
++ P AL FA D Y +++ R+ SS + SC AG T V P
Sbjct: 68 ILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGSC--AGFTETFVVVPF 125
Query: 602 D 604
+
Sbjct: 126 E 126
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 278 VSPIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTH 457
V P E +K+ LQ + +Y G VD F +I K + +L+ + G A + R+ +
Sbjct: 122 VVPFELMKIRLQ------DVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWN 175
Query: 458 ALNFAFKDKYK 490
A F K +
Sbjct: 176 AGYFGVIQKIR 186
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 284 PIERVKLLLQVQH-VS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHA 460
P++ +K +Q+ + VS ++ + IV++ +I +G+ S WRG + ++ P+HA
Sbjct: 39 PVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 461 LNFAFKDKYKQVFLGGLTRRRSSA 532
+ F+ + +K R +SA
Sbjct: 94 IYFSVLEFFKSKINASPDRPLASA 117
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.7 bits (66), Expect = 0.17
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 284 PIERVKLLLQVQHVS*QIAADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHAL 463
PI+ VK +Q ++A + YK + ++I GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 464 NFAFKDKYKQV 496
F +K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.40
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 338 AADQRYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHALNFAFKDKYKQVFLGGLTR 517
A Y DAF +I K +GL +F+RG F ++ + F + +K FL
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKS-FLDDFFG 282
Query: 518 RRSSAY--FAGNLASCGAAGAT 577
++S+ + A L+ A+ T
Sbjct: 283 KKSNFHIVLAATLSKIAASTVT 304
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 65 SRDYYITPYLLFKNQELVFRYPPSACSATPTSTYSPSEDHIIEQYVEP 208
SR Y + K F+Y P A S TPT SP + + V P
Sbjct: 514 SRRYSRNKFHKKKQSSGPFQYYPDAFSFTPTDNNSPPSNSSSSEVVSP 561
>SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 410
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 355 QGYRRCLLPYPQGAGSPFILAW*LRQRHQVL 447
Q +RC+L Y G + ILAW + + +V+
Sbjct: 3 QEVKRCVLAYSGGLDTSCILAWLIEEGWEVI 33
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 4.9
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +2
Query: 395 QGLLSFWRGNFANVIRYFPTHALNFAFKDKYKQVFLGGLTRRRSSAYFAGNLASCGAAGA 574
+G+ + WRGN + Y A F K K LT + A N +AG
Sbjct: 62 EGVRALWRGNVVAELLYLVYGAAEFVAFSKLKH-----LTENLAMNDHAVNFLCGTSAGI 116
Query: 575 TSLCFVYPLD 604
+ YPLD
Sbjct: 117 FATLTSYPLD 126
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.8 bits (54), Expect = 4.9
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 142 FRNSHLDIFT**RSHNRTICRTSPIRSLSLRTSWLAVSRCRLLDRRITHRACQAAAPSTA 321
+ SH+ +F T R SPIR LS + S +VS + T+ + P
Sbjct: 773 YLRSHVSLFETYNDDEATSLRPSPIRLLS-QKSLASVSSVSSIS---TYSSSIELTPQIT 828
Query: 322 RQLADRCRPALQG 360
+ +R +PAL G
Sbjct: 829 KTSLNREKPALHG 841
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 250 VSRCRLLDRRITHRACQAAAPSTARQLADRCRPALQGYRR 369
VSR R+I +++ S+A + RC LQG+ R
Sbjct: 440 VSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSR 479
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 128 PPSACSATPTSTYSPSED 181
PPSA S P+S+ SPS D
Sbjct: 374 PPSATSFQPSSSRSPSVD 391
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 113 LVFRYPPSACSATPTSTYSPSEDHIIEQYVEPRRSGR 223
LVF SA SA + S I +QYV PR +G+
Sbjct: 357 LVFMAVTSAASAELIAVSSIFTYDIYKQYVRPRATGK 393
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +2
Query: 350 RYKGIVDAFFRIPKVQGLLSFWRGNFANVIRYFPTHALNF 469
+Y G++ F + QG++ + G A+++R P + F
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,428,520
Number of Sequences: 5004
Number of extensions: 49255
Number of successful extensions: 145
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -