BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021960
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 48 1e-05
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 45 7e-05
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 45 7e-05
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 41 8e-04
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 40 0.002
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 40 0.003
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 38 0.008
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 38 0.010
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 38 0.010
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 37 0.014
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 36 0.032
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 36 0.032
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.042
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 36 0.042
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 33 0.23
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 33 0.23
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 33 0.23
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 33 0.30
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 32 0.52
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 32 0.52
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.2
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 31 1.2
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 31 1.2
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 31 1.2
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 31 1.2
Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 30 1.6
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 30 2.1
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 29 3.7
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 29 4.8
AF022971-7|AAG23973.2| 226|Caenorhabditis elegans Hypothetical ... 29 4.8
AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.8
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 28 6.4
AF025452-7|AAB70941.2| 335|Caenorhabditis elegans Serpentine re... 28 6.4
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 8.5
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 8.5
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 28 8.5
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 8.5
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +3
Query: 336 RGYYIDATTIVECLHSFCRSCIIKHLKA-KSYCPVCEMMINSAKPN--IKLDKALQDIVY 506
+GY +DATTI++C+H+FC+SC++ + ++ + CP C I+ + P + D+A+ ++V
Sbjct: 306 KGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTHYVTYDRAVNELVN 365
Query: 507 NLCLWLFQKEMERRQHFYASRPGQAATATPEQRGEDTERI 626
+ E++ R+ F T + E ER+
Sbjct: 366 QFVPKMENNELDVRKTFLRDCREALGIDTAAEDRERKERL 405
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 309 NEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKA 488
+E C +C ++++ I+EC HS+CR CI HL CP+C + N +L+
Sbjct: 3 DEDFCCAVCLDFFVEPC-IIECGHSYCRFCIESHLNINEKCPLCRAHTGNPIRNRQLESL 61
Query: 489 LQDIV 503
V
Sbjct: 62 TMSYV 66
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 285 QRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMIN--- 455
Q+ + +++ + CPLC + D +V C HS+C CI +H + C +C++ +
Sbjct: 43 QQPVRRDLSSELLCPLCDQLF-DRPVMVTCGHSYCEPCIERHTRDTRACVICKLDVGPFA 101
Query: 456 SAKPNIKLDKALQDI 500
+ P+I LD ++ +
Sbjct: 102 AMIPSITLDNMVRKL 116
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 285 QRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMIN--- 455
Q+ + +++ + CPLC + D +V C HS+C CI +H + C +C++ +
Sbjct: 43 QQPVRRDLSSELLCPLCDQLF-DRPVMVTCGHSYCEPCIERHTRDTRACVICKLDVGPFA 101
Query: 456 SAKPNIKLDKALQDI 500
+ P+I LD ++ +
Sbjct: 102 AMIPSITLDNMVRKL 116
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 264 SNVAVVPQ-RTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKS--YCP 434
SN+ PQ + + E E C +C+ ID T++ +C H FC CI+ L S +CP
Sbjct: 22 SNMTESPQSKEEIDEPEEE--CSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCP 79
Query: 435 VCEMMIN 455
+C+ ++
Sbjct: 80 MCKTPVS 86
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 324 CPLCRGYY---IDATTIVECLHSFCRSCIIKH-LKAKSYCPVCEMMINSAKPNIKLDKAL 491
CP C Y + A ++ C H+FC C+ KH + K +C +C+ + PN+ L +
Sbjct: 15 CPGCETQYDVRLHAPHVLPCSHTFCLMCLSKHDQRKKRHCLICKTKYSKFAPNLALMEVF 74
Query: 492 QDI 500
Q I
Sbjct: 75 QRI 77
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 297 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCI--IKHLKAKSYCPVCEMMIN--SAK 464
+ + + + C +C Y D + C H FCRSCI K K CP+C +++ S +
Sbjct: 12 VARLQKELKCGICCSTYKDPI-LSTCFHIFCRSCINACFERKRKVQCPICRSVLDKRSCR 70
Query: 465 PNIKLDKALQDIVYNLCLWLFQKEMERRQHFYASRP 572
++ A+Q+ Y F+K++E F + P
Sbjct: 71 DTYQITMAVQN--YLKLSEAFKKDIENMNTFKSLPP 104
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 309 NEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPN 470
+E C +C G + + EC H FC+ CI L KS CP+C + N
Sbjct: 332 HEEQPCAVCHGDLLQPIKL-ECTHVFCKFCIETWLDQKSTCPICRAEVTKDADN 384
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 303 EVNEHI-TCPLCRGYYID--ATTIVECLHSFCRSCIIKHLKA----------KSYCPVCE 443
+VNE + TCP+C+ + D A I+ C HS C +CI+ HLK+ ++ CP C
Sbjct: 2 DVNEELPTCPVCQEEFDDQKAPFIISCGHSLCETCIV-HLKSDYSDAYGSGGQTQCPTCR 60
Query: 444 MMINSAK 464
+++ K
Sbjct: 61 AVVSKEK 67
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVC----EMMINSAK 464
C +C ++D + +C H FC C +K + S CP+C E ++N+AK
Sbjct: 241 CFICGNPFVDPI-VTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAK 290
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVC----EMMINSAK 464
C +C ++D + +C H FC C +K + S CP+C E ++N+AK
Sbjct: 241 CFICGNPFVDPI-VTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAK 290
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 312 EHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMIN-SAKPNIKLDKA 488
+ + C +C ++ T+ C HSFC+ CI + L CP C+ + S K I +K
Sbjct: 96 DDVLCTICYDIIVEPHTL-RCQHSFCKKCIDQCLPLTRKCPSCQQWVYWSRKNKIFKEKV 154
Query: 489 LQ 494
L+
Sbjct: 155 LR 156
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 312 EHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDK 485
E + C +C + T + C HS C C + L + S CP+C + N L K
Sbjct: 22 EDVQCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCRTRVREIHLNDDLKK 79
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 351 DATTIVECLHSFCRSCIIKHLKAKSYCPV--CEMMINSAKP 467
+AT ++ CLH+FC C+ K K CPV C + + +P
Sbjct: 16 EATQLIPCLHTFCTKCLKKSTKKMRVCPVAHCYSSLTAPEP 56
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 309 NEHITCPLCRGYYIDATTIVECLHSFCRSCIIK----HLKAKS 425
++H +CP C+ + +++CLHS C CII HL+AKS
Sbjct: 57 DDHASCPYCQQDF-RKPRVLDCLHSMCEDCIIAQLDGHLQAKS 98
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 264 SNVAVVPQRTLLG-EVNEHITCPLCRGYYID----ATTIVECLHSFCRSCIIKHLKAKSY 428
S+V P R ++ E+ + C +C + D + C H+FC SC+ LK++
Sbjct: 13 SSVLPHPLRGVVSLEMASRLECSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQDT 72
Query: 429 CPVCEMMIN 455
CP+C +N
Sbjct: 73 CPMCREAVN 81
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCII-KHLKAKSYCPVCEMMINS---AKPNIKLD 482
CP+C+ I TTI C H FC C+ ++ CP+C I+S A+P+ LD
Sbjct: 12 CPICQCKMIVPTTIPACGHKFCFICLKGVYMNDMGGCPMCRGPIDSNIFAQPSQVLD 68
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 297 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCI-IKHLKAKSYCPVCEMMINSAKPNI 473
L +V +C +C+ + +C H FC CI + +++ + CP C + S K +
Sbjct: 153 LQKVIGSFSCDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGS-KREL 211
Query: 474 KLDKALQDIVYNL 512
+ D ++Y +
Sbjct: 212 QQDPRFDQLIYQV 224
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 366 VECLHSFCRSCIIKHLKAKSYCPVCEMMIN 455
++C H F R CI LK K+ CPVC +N
Sbjct: 254 LDCNHIFHRPCIEPWLKTKNSCPVCRQKVN 283
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 255 MDNSNVAVVPQRTLLGEVNEHITCPLCRGYYIDATTI--VECLHSFCRSCIIKHLKAKSY 428
+D + V + GE +E TC +C + D +I + C H F CI K L
Sbjct: 411 IDTFTIPTVYAKKTDGEEDED-TCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKR 469
Query: 429 CPVCEMMIN 455
CP+C I+
Sbjct: 470 CPMCREEID 478
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 273 AVVPQRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 452
A VP G +H C +C T I C H FC C+ + + CPVC I
Sbjct: 90 AGVPYMKKEGFQQDHDICYICYYKLTIPTRIENCGHEFCYVCLKSNFAMGNDCPVCRGKI 149
Query: 453 N 455
+
Sbjct: 150 S 150
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 303 EVNEHITCPLCRGYYIDATTIVECLHSFCRSCI-IKHLKAKSYCPVC 440
++ E +TCP C+ D +++C H FC +CI + + CP C
Sbjct: 775 QMKETLTCPSCKTRPKDCI-MLKCYHLFCETCIKTMYDTRQRKCPKC 820
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 303 EVNEHITCPLCRGYYIDATTIVECLHSFCRSCI-IKHLKAKSYCPVC 440
++ E +TCP C+ D +++C H FC +CI + + CP C
Sbjct: 778 QMKETLTCPSCKTRPKDCI-MLKCYHLFCETCIKTMYDTRQRKCPKC 823
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 282 PQRTLLGEVNEHIT--CPLCRGYYIDATTIVECLHSFCRSCII-KHLKAKSYCPVCEMMI 452
P + L +N I C +C I TTI C H FC C+ + CP+C I
Sbjct: 8 PSQQLQQAINSTIDKECAVCYSEMILPTTIPSCGHKFCFICLKGVSVSNNGDCPICRGPI 67
Query: 453 NS 458
+S
Sbjct: 68 DS 69
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 297 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCI---IKHLKAKSYCPVCEMMINSAKP 467
L ++ + +TCP+C Y ++ C H+FC C+ L CP C N
Sbjct: 34 LEKIEQLLTCPICLDRY-KQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYD 92
Query: 468 NIK 476
+K
Sbjct: 93 GVK 95
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 297 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCI---IKHLKAKSYCPVCEMMINSAKP 467
L ++ + +TCP+C Y ++ C H+FC C+ L CP C N
Sbjct: 34 LEKIEQLLTCPICLDRY-KQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYD 92
Query: 468 NIK 476
+K
Sbjct: 93 GVK 95
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 285 QRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFC--RSCIIKHLKAKSYCPVCEM 446
Q T + H+T G + A T+V+ +S RS +++H+ + C CE+
Sbjct: 478 QETYTWNIIRHVTMQSTHGMNLVANTLVQVAYSLSPIRSIVLRHICTEDSCITCEL 533
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.52
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = +3
Query: 210 KNGYV*NNFR*KSC*MDNSNVAVVPQRTLLGEVNEHITCPLC--RGYYIDATTIVECLHS 383
K G + NFR KS +N+ P L + C +C Y T EC
Sbjct: 410 KPGILVGNFR-KSPGKNNTVTVSAPSSEL-----DDTECAICLEEMYNFKETIKCECRRR 463
Query: 384 FCRSCIIKHLKAKSYCPVC-EMMIN-SAKPNIK 476
F C K L K CP C ++M+N S P +K
Sbjct: 464 FHSKCATKWLNEKRECPTCRKLMLNPSDYPPLK 496
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKS--YCPVCEMMINS 458
C +C D ++ CLH+FC CI ++ + CP+C+ I +
Sbjct: 129 CVICMENINDL--LLPCLHAFCIRCIANEMEYRHDFSCPICKTKIRN 173
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 321 TCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDI 500
TC +C D+ + C HSF C+ + A + CPVC + P + ++ D
Sbjct: 259 TCAVCLERMDDSVLAILCNHSFHARCLEQW--ADNTCPVCRYV---QSPEVVAEQRCNDC 313
Query: 501 VYNLCLWL 524
+ LW+
Sbjct: 314 GMSNDLWI 321
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 324 CPLCRGYYIDATT---IVECLHSFCRSCIIKHLKAKSYCPVC 440
CP+C Y + +++C H+ C +CII + P+C
Sbjct: 190 CPICCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPIC 231
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Frame = +3
Query: 273 AVVPQRTLLGE-VNEHITCPLCRGYYIDATTI---VECLHSFCRSCIIKHLK----AKSY 428
A P L+G+ + E + C +C Y + T + + C H+FC CI K A
Sbjct: 20 AASPAFPLIGDFLEEFLKCQVCCTNYNETTKLARGLHCGHTFCTECIKTMQKYGNSAYLE 79
Query: 429 CPVCEMMINSAKPNIKLDKALQDIVYNLCLWLFQKEMERRQHFYASRP 572
CP C + + A+ +++ C +L ++ E A++P
Sbjct: 80 CPSCRAETKCDIAAVSTNFAIMELI-RKCGFLGPEKPEEPPMKQAAQP 126
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 312 EHITCPLCRGYYIDATTIVE-CLHSFCRSCIIKHL--KAKSYCPVC 440
E + C +C +E C HSFC SCI + + + CP+C
Sbjct: 64 EELQCTICLSTRFSQECRIEGCNHSFCFSCISEWVCQSLRPSCPMC 109
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +3
Query: 261 NSNVAVVPQRTLLGEVNEHIT---CPLCRGYYIDATT--IVECLHSFCRSCIIKHLKAKS 425
+S +AV T + + + H C +C Y + T ++ C H F C+ L +K
Sbjct: 293 SSYLAVFGSLTSVAQSSSHSAQERCVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKR 352
Query: 426 YCPVCE 443
CP+C+
Sbjct: 353 RCPLCQ 358
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 306 VNEHITCPLCRGYYIDATTIVECLHSFCRSCIIK 407
+ E + C +C ++ D I+ C HS CR C +K
Sbjct: 1 MEEELKCTICIRFFEDPI-ILTCGHSLCRMCALK 33
>Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical
protein F08B12.2 protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPV 437
CP+C ++ T + + FC +CI +++ + CPV
Sbjct: 307 CPICLKKRVNDTALFVSGYVFCYTCINQYVNTYNKCPV 344
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 363 IVECLHSFCRSCIIKHLKAKSY-CPVC-EMMINSAKPNIKLDKALQDIV 503
I++C HS C+ C K LK + CP C E SA +++ + AL I+
Sbjct: 25 ILKCGHSVCQCCATKLLKNSAISCPFCRETTSVSAVKDLQKNFALLQII 73
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVC 440
C +C + I C H F C+ K L K CP+C
Sbjct: 604 CAICFIEMKEEARITPCKHYFHGPCLRKWLAVKMVCPLC 642
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 321 TCPLCRGYYIDATT----IVECLHSFCRSCIIKHLKAKS 425
TC +C + DA + ++ C HSFC CI KHL++ +
Sbjct: 25 TCSICMEEF-DANSHIPKVLICGHSFCIICIEKHLRSSN 62
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 14/77 (18%)
Frame = +3
Query: 312 EHITCPLCRGYYIDATTIVECLHSFCRSCI--IKHLKAKS----------YCPVCEMMIN 455
E + C +C + + C HSFC CI + H + + +CP+C ++
Sbjct: 36 ETLRCAVCLNIFQGIPQTLTCGHSFCHRCIEEVAHSEVMNDTREPNRNSFHCPICRKRVS 95
Query: 456 SAK--PNIKLDKALQDI 500
+K N L L I
Sbjct: 96 MSKVIQNYTLKNVLDSI 112
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 303 EVNEHITCPLCRGYYIDATTIVECLHSFCRSCI 401
+V + CP+C+ + +A C +S+C CI
Sbjct: 236 KVPPELLCPICQSLFKEAIVTSCCGNSYCADCI 268
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 303 EVNEHITCPLCRGYYIDATTIVECLHS-FCRSCIIKHLKAKSYCPVC 440
EVNE C +C +++ + C H C C + L K CP+C
Sbjct: 379 EVNEGDECTICMDAPVNSV-LYTCGHMCMCFECGRRLLTTKGTCPIC 424
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 303 EVNEHITCPLCRGYYIDATTIVECLHS-FCRSCIIKHLKAKSYCPVC 440
EVNE C +C +++ + C H C C + L K CP+C
Sbjct: 559 EVNEGDECTICMDAPVNSV-LYTCGHMCMCFECGRRLLTTKGTCPIC 604
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 366 VECLHSFCRSCIIKHLK-AKSYCPVCEMMINSAKPNIK 476
++C H+ C CI K LK + CP C NIK
Sbjct: 26 LKCSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIK 63
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 324 CPLCRGYYIDATTIVECLHSFCRSCIIKHLKAK---SYCPVCEMMINSAK 464
C +C DA + C H FC C+ + L + CPVC+ I+ K
Sbjct: 26 CNICLDAAKDAVVSL-CGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNK 74
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 363 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 464
++ C H F C+ L+A+ CP C + + K
Sbjct: 108 VMPCKHRFHYFCLTLWLEAQQTCPTCRQKVKTDK 141
>AF022971-7|AAG23973.2| 226|Caenorhabditis elegans Hypothetical
protein C31B8.2 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = +3
Query: 321 TCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKS-YCP-------VCEMMINSA-KPNI 473
T P C+ Y +DA T V+ L++ +S I L +++ CP + E +NSA + +
Sbjct: 65 TSPTCQFYDVDAVTTVQKLNASSQSRIAFRLLSRNRTCPNLEASPILKEGTVNSAVQQDY 124
Query: 474 KLDKALQDIVYNLCLWLFQKEMERRQHFYASRPGQ--AATATPEQRGED 614
++++ Q + N L ++ ++ + +R + T +P +RG D
Sbjct: 125 RIEQGTQSLTINQYL-PYRISLKTNVWTFTTRSERFDCITGSPTRRGND 172
>AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical
protein K09F6.7 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 366 VECLHSFCRSCIIKHL-KAKSYCPVCEMMINSAKPNIKLDKALQDIVYNLCLWLFQK 533
++C H+ C CI K L +K CP C + P K++ ++ + LF K
Sbjct: 25 LKCSHTLCEGCIKKMLGNSKIVCPFCREPTD--MPGNKMESLHKNFALIQAIQLFAK 79
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 369 ECLHSFCRSCIIKHLKAKSYCPVCE 443
+C HSF C+ + ++ + CP+C+
Sbjct: 78 DCNHSFHHCCMTQWIRQNNRCPLCQ 102
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 279 VPQRTLLGEVNEHIT--CPLCRGYYI--DATTIVECLHSFCRSCIIKHLKAKSYCPVCE 443
+P T+ + + + C +C Y D ++ C H + +SCI L CP+C+
Sbjct: 210 IPTMTITPGMTQELQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCK 268
>AF025452-7|AAB70941.2| 335|Caenorhabditis elegans Serpentine
receptor, class i protein28 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 482 VKFDIGFCRIYHHFTYRTVALCFKV 408
+ F++ F IYH +T T+A+C +
Sbjct: 7 IDFEVPFHMIYHFYTTGTIAVCLNI 31
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 366 VECLHSFCRSCIIKHLK-AKSYCPVCEMMINSAKPNIK 476
++C H+ C CI K L ++ CP C NIK
Sbjct: 55 LKCCHTLCEGCIKKLLNYSRIVCPFCREPTEVPGNNIK 92
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 454 IRQNPISNLTKHCRT*STTCACGSSKKKWKGGNIFMPRGLDKPQQPH 594
+ PI ++ CR A +W+G + +P G+D+P H
Sbjct: 851 MHSQPILHIATACRPSFNVLASCEKNSQWQGSMLIIP-GVDRPWHSH 896
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 452 YHHFTYRTVALCFKVFNNTTTTKGMQAFHYCGR 354
YH+ TYR++A + T + K + FH GR
Sbjct: 447 YHNITYRSIAPPVEFQVGTISAKELHKFHRIGR 479
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 452 YHHFTYRTVALCFKVFNNTTTTKGMQAFHYCGR 354
YH+ TYR++A + T + K + FH GR
Sbjct: 447 YHNITYRSIAPPVEFQVGTISAKELHKFHRIGR 479
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 454 IRQNPISNLTKHCRT*STTCACGSSKKKWKGGNIFMPRGLDKPQQPH 594
+ PI ++ CR A +W+G + +P G+D+P H
Sbjct: 851 MHSQPILHIATACRPSFNVLASCEKNSQWQGSMLIIP-GVDRPWHSH 896
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 279 VPQRTLLGEVNEHITCPLCRGYYIDATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMI 452
+P G++ + C +C + I + C+HSF + C+ + L CP C +
Sbjct: 81 IPADVFRGDMTSN-ECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSCLEPV 139
Query: 453 NS 458
+S
Sbjct: 140 DS 141
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 363 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIK--LDKALQDIVYNLCLWLFQKE 536
+ C H+ C CI K L +++ ++ S + N + L I N C+ Q
Sbjct: 132 VFPCGHTICLQCIKKLLNTRTFLGGNTVICPSCRQNTRYSLTTPADKIPTNFCI---QSL 188
Query: 537 MERRQHFYASRPGQAATAT 593
+E+RQ +++ +A T
Sbjct: 189 LEQRQQEKSTKEPEAVKCT 207
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 452 YHHFTYRTVALCFKVFNNTTTTKGMQAFHYCGR 354
YH+ TYR++A + T + K + FH GR
Sbjct: 447 YHNITYRSIAPPVEFQVGTISAKELHKFHRIGR 479
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 363 IVECLHSFCRSCIIKHLK-AKSYCPVCEMMIN 455
I++C HS C+SC K K CP C N
Sbjct: 152 ILQCGHSICQSCASKLAKNCVILCPFCRNETN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,126,895
Number of Sequences: 27780
Number of extensions: 400717
Number of successful extensions: 1139
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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