Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021959X
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               29   0.035
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   4.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   4.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   4.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   4.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +1

Query: 124 WSP--QGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEFPHIRRKLFLLMNIL 297
           W P  + RL  + Y +   KLGSA  G    D +  + L+   + F     + FL+ NI+
Sbjct: 546 WLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWANVFAKGDMEAFLVKNII 605

Query: 298 EXLHQVSLQKLVCESLHAH 354
             L Q++L + V      H
Sbjct: 606 PKL-QIALSEFVINPHQQH 623


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 412 DETSNWHWSIM 380
           DE SNW+W+ +
Sbjct: 21  DEGSNWNWNTL 31


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 412 DETSNWHWSIM 380
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 412 DETSNWHWSIM 380
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 412 DETSNWHWSIM 380
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 139  RLHQVEYAMEAVKLGSATIGLKNKDYAVLIAL 234
            ++ + E   E  K+G   IGL +  + V +AL
Sbjct: 1546 KVEENEIIFEIYKMGDRFIGLTSDKFDVSLAL 1577


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 220  PHSPYSSDQWLQNQVSQLPLHTPLDGDGLED 128
            P++ Y+      NQV   PL  PL    +ED
Sbjct: 1079 PYTKYTLVVQAYNQVGSGPLSEPLLTQTMED 1109


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 220  PHSPYSSDQWLQNQVSQLPLHTPLDGDGLED 128
            P++ Y+      NQV   PL  PL    +ED
Sbjct: 1075 PYTKYTLVVQAYNQVGSGPLSEPLLTQTMED 1105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,602
Number of Sequences: 438
Number of extensions: 2810
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)