Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021958
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 161 1e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 161 1e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 161 1e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 95 7e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 93 4e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 75 8e-15
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.008
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.008
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 35 0.011
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 35 0.011
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.034
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.034
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.14
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.18
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 30 0.42
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.73
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 29 0.96
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 28 1.3
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 28 1.7
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 2.9
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 2.9
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 27 3.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 161 bits (391), Expect = 1e-40
Identities = 76/87 (87%), Positives = 80/87 (91%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET KY VT+IDAPGH DFIKNMITGTSQADCAVLI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 140 bits (338), Expect = 3e-34
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 527 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 706
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 707 KADGKCLIEALDAILPPARP 766
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 161 bits (390), Expect = 1e-40
Identities = 75/87 (86%), Positives = 80/87 (91%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET KY VT+IDAPGH DFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 140 bits (338), Expect = 3e-34
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 527 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 706
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 707 KADGKCLIEALDAILPPARP 766
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 161 bits (390), Expect = 1e-40
Identities = 75/87 (86%), Positives = 80/87 (91%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET KY VT+IDAPGH DFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 140 bits (338), Expect = 3e-34
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 527 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 706
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 707 KADGKCLIEALDAILPPARP 766
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 95.5 bits (227), Expect = 7e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 258 TIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 437
T+++ FET +++DAPGH ++ NMI G SQAD VL+++A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 438 QTREHALLAFTLGVKQLIVGVNKM 509
QTREHA+LA T G+ L+V +NKM
Sbjct: 363 QTREHAVLARTQGINHLVVVINKM 386
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2
Query: 59 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKLK 238
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 239 AERE 250
ERE
Sbjct: 296 EERE 299
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 93.1 bits (221), Expect = 4e-20
Identities = 44/87 (50%), Positives = 56/87 (64%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R +T+D+A FE+ K I DAPGH DFI MI G S AD AVL+V + FE G
Sbjct: 239 RGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFL 298
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
+NGQTREHA L LG+ +++V VNK+
Sbjct: 299 ENGQTREHAYLLRALGISEIVVSVNKL 325
Score = 73.3 bits (172), Expect = 3e-14
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +2
Query: 59 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKLK 238
K +++VV GHVDSGKST G ++++ G I+ R+++K EA +GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 239 AER 247
ER
Sbjct: 235 EER 237
Score = 48.8 bits (111), Expect = 8e-07
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +2
Query: 527 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--EPSTKMPWFKGWQVER 697
+SE RF+EIK VS + IK +G+ + V FVPIS G N++ + S W+K
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYK------ 383
Query: 698 KEGKADGKCLIEALDAILPPARP 766
G L+ ALD ++PP +P
Sbjct: 384 ------GPTLLSALDQLVPPEKP 400
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 75.4 bits (177), Expect = 8e-15
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 100 RGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP---- 155
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
QTREH LLA +GVKQ++V +NK+
Sbjct: 156 ---QTREHLLLARQVGVKQIVVYINKV 179
Score = 35.1 bits (77), Expect = 0.011
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 53 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 139
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 297 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 297 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 35.1 bits (77), Expect = 0.011
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 300 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 479
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 480 KQLIVGVNKM 509
K +I+ NK+
Sbjct: 163 KHIIILQNKV 172
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 35.1 bits (77), Expect = 0.011
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 282 FETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 452
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.73
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI 148
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.034
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 282 FETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 33.5 bits (73), Expect = 0.034
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
R ITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
Score = 28.7 bits (61), Expect = 0.96
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCG 142
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 31.5 bits (68), Expect = 0.14
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 273 LWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.1 bits (67), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 297 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 29.9 bits (64), Expect = 0.42
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 240 LSVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIV 392
+S++ + +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 0.73
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 309 IIDAPGHXDFIKNMITGTSQADCAVLIV 392
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.7 bits (61), Expect = 0.96
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +3
Query: 390 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKYP 569
VA GT E GI NG E+A+ A +I V++ P++H + KSRR+YP
Sbjct: 47 VAEGTAE---GIVSNG---EYAVGAMGAAPTNIIGSVDQQPPVSHTS-----HKSRRQYP 95
Query: 570 HTSRRLATTQLLSLSCPFL 626
L T S + P L
Sbjct: 96 AEVFELTNTLAASPAPPSL 114
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 765 GRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCH 628
G GG S+ P+ LPS + P L E +ML CH
Sbjct: 545 GAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 92 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKLKA 241
+D G+ST +L Y+ T E FEK + +GK + +Y+ + K KA
Sbjct: 211 LDPGESTNK-NLFYE---FPNGTTEPFEKNSVHSGKETLQYSATISKWKA 256
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 528 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 698
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 699 RKA 707
++
Sbjct: 205 SQS 207
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 2.9
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -3
Query: 290 SFELPESNIDCDPPHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 111
S L N D + V +PK I I++ F P S S C+Y S D W
Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71
Query: 110 WT 105
T
Sbjct: 72 RT 73
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 255 ITIDIALWKFETSKYYV--TIIDAPGHXDFIKN 347
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,201,059
Number of Sequences: 5004
Number of extensions: 68393
Number of successful extensions: 257
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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