BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021958 (766 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 184 5e-47 U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 165 4e-41 U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 165 4e-41 U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 8e-35 U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 2e-32 Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 7e-26 Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 7e-26 Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 102 3e-22 U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 72 4e-13 AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 72 4e-13 D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 68 8e-12 D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 68 8e-12 AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 68 8e-12 Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.004 Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.004 AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.096 L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.13 AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.17 Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.22 Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.29 M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.29 U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.39 M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.39 AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 32 0.51 L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.90 AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.90 Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 30 2.1 Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 30 2.1 Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 30 2.1 Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 30 2.1 U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 30 2.1 DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 2.7 AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7 AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7 AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7 AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7 Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.8 Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 6.3 Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 28 6.3 U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 28 6.3 AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 8.4 AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 8.4 >U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor protein 4, isoformc protein. Length = 267 Score = 184 bits (449), Expect = 5e-47 Identities = 105/169 (62%), Positives = 112/169 (66%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITIDIALWKFET+KYY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GTGEFEAGIS Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLS 608 KNGQTREHALLA TLGVKQL + L T SPD +SRR T Q L Sbjct: 129 KNGQTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTIQRLF 171 Query: 609 LSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCH 755 D TETTC C GSRDG + RK L E S +L PS H Sbjct: 172 HLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSH 220 Score = 143 bits (347), Expect = 1e-34 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE GKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 227 DKLKAERE 250 DKLKAERE Sbjct: 61 DKLKAERE 68 >U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor protein 4, isoforma protein. Length = 463 Score = 165 bits (400), Expect = 4e-41 Identities = 78/87 (89%), Positives = 81/87 (93%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITIDIALWKFET+KYY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GTGEFEAGIS Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509 KNGQTREHALLA TLGVKQLIV NKM Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKM 155 Score = 144 bits (348), Expect = 8e-35 Identities = 64/86 (74%), Positives = 72/86 (83%) Frame = +2 Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688 DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215 Query: 689 VERKEGKADGKCLIEALDAILPPARP 766 VERKEG A GK L+EALD+I+PP RP Sbjct: 216 VERKEGNASGKTLLEALDSIIPPQRP 241 Score = 143 bits (347), Expect = 1e-34 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE GKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 227 DKLKAERE 250 DKLKAERE Sbjct: 61 DKLKAERE 68 >U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor protein 3 protein. Length = 463 Score = 165 bits (400), Expect = 4e-41 Identities = 78/87 (89%), Positives = 81/87 (93%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITIDIALWKFET+KYY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GTGEFEAGIS Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509 KNGQTREHALLA TLGVKQLIV NKM Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKM 155 Score = 144 bits (348), Expect = 8e-35 Identities = 64/86 (74%), Positives = 72/86 (83%) Frame = +2 Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688 DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215 Query: 689 VERKEGKADGKCLIEALDAILPPARP 766 VERKEG A GK L+EALD+I+PP RP Sbjct: 216 VERKEGNASGKTLLEALDSIIPPQRP 241 Score = 143 bits (347), Expect = 1e-34 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE GKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 227 DKLKAERE 250 DKLKAERE Sbjct: 61 DKLKAERE 68 >U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor protein 4, isoformd protein. Length = 429 Score = 144 bits (348), Expect = 8e-35 Identities = 64/86 (74%), Positives = 72/86 (83%) Frame = +2 Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688 DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW Sbjct: 122 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 181 Query: 689 VERKEGKADGKCLIEALDAILPPARP 766 VERKEG A GK L+EALD+I+PP RP Sbjct: 182 VERKEGNASGKTLLEALDSIIPPQRP 207 Score = 143 bits (347), Expect = 1e-34 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE GKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 227 DKLKAERE 250 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 98.7 bits (235), Expect = 4e-21 Identities = 44/49 (89%), Positives = 47/49 (95%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVA 395 R ITIDIALWKFET+KYY+TIIDAPGH DFIKNMITGTSQADCAVL+VA Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 >U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor protein 4, isoformb protein. Length = 77 Score = 136 bits (329), Expect = 2e-32 Identities = 62/67 (92%), Positives = 63/67 (94%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE GKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 227 DKLKAER 247 DKLK + Sbjct: 61 DKLKVTK 67 >Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein K07A12.4b protein. Length = 592 Score = 114 bits (274), Expect = 7e-26 Identities = 54/87 (62%), Positives = 64/87 (73%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R +T+DI FETS + ++DAPGH DFI NMITGTSQAD A+L+V A TGEFE G Sbjct: 232 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 291 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509 GQT+EHALL +LGV QLIV VNK+ Sbjct: 292 NGGQTKEHALLLRSLGVTQLIVAVNKL 318 Score = 83.8 bits (198), Expect = 1e-16 Identities = 36/65 (55%), Positives = 48/65 (73%) Frame = +2 Query: 56 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKL 235 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226 Query: 236 KAERE 250 + ERE Sbjct: 227 EEERE 231 Score = 42.3 bits (95), Expect = 4e-04 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Frame = +2 Query: 527 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 703 +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY--------- 370 Query: 704 GKADGKCLIEALDAILPPARP 766 DG CL+E +D+ + P P Sbjct: 371 ---DGPCLLELIDSFVAPQPP 388 >Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein K07A12.4a protein. Length = 610 Score = 114 bits (274), Expect = 7e-26 Identities = 54/87 (62%), Positives = 64/87 (73%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R +T+DI FETS + ++DAPGH DFI NMITGTSQAD A+L+V A TGEFE G Sbjct: 250 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 309 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509 GQT+EHALL +LGV QLIV VNK+ Sbjct: 310 NGGQTKEHALLLRSLGVTQLIVAVNKL 336 Score = 83.8 bits (198), Expect = 1e-16 Identities = 36/65 (55%), Positives = 48/65 (73%) Frame = +2 Query: 56 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKL 235 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244 Query: 236 KAERE 250 + ERE Sbjct: 245 EEERE 249 Score = 42.3 bits (95), Expect = 4e-04 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Frame = +2 Query: 527 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 703 +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY--------- 388 Query: 704 GKADGKCLIEALDAILPPARP 766 DG CL+E +D+ + P P Sbjct: 389 ---DGPCLLELIDSFVAPQPP 406 >Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein H19N07.1 protein. Length = 532 Score = 102 bits (244), Expect = 3e-22 Identities = 45/84 (53%), Positives = 60/84 (71%) Frame = +3 Query: 258 TIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 437 T+++ FET K + TI+DAPGH F+ NMI G +QAD AVL+++A GEFE G + G Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233 Query: 438 QTREHALLAFTLGVKQLIVGVNKM 509 QTREH++L T GVK L++ VNKM Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKM 257 Score = 79.0 bits (186), Expect = 3e-15 Identities = 34/67 (50%), Positives = 48/67 (71%) Frame = +2 Query: 50 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLD 229 G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163 Query: 230 KLKAERE 250 ERE Sbjct: 164 TNDEERE 170 Score = 39.9 bits (89), Expect = 0.002 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Frame = +2 Query: 497 SKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPW 673 +K +D T + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T Sbjct: 255 NKMDDPTVK-WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSE- 312 Query: 674 FKGWQVERKEGKADGKCLIEALDAILP 754 W G C IE +D +LP Sbjct: 313 -GNWY--------SGPCFIEFIDVLLP 330 >U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 2 protein. Length = 439 Score = 72.1 bits (169), Expect = 4e-13 Identities = 40/86 (46%), Positives = 53/86 (61%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNK 506 QT+EH +LA +GVK + + +NK Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINK 170 Score = 28.7 bits (61), Expect = 4.8 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 59 KTHINIVVIGHVDSGKSTTT 118 K ++N+ IGH+D GK+T T Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62 >AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial elongation factorTu homologue protein. Length = 439 Score = 72.1 bits (169), Expect = 4e-13 Identities = 40/86 (46%), Positives = 53/86 (61%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNK 506 QT+EH +LA +GVK + + +NK Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINK 170 Score = 28.7 bits (61), Expect = 4.8 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 59 KTHINIVVIGHVDSGKSTTT 118 K ++N+ IGH+D GK+T T Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62 >D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 495 Score = 67.7 bits (158), Expect = 8e-12 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 96 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 151 Query: 429 KNGQTREHALLAFTLGV--KQLIVGVNKM 509 QTREH LLA +GV ++V +NK+ Sbjct: 152 ---QTREHLLLARQVGVPLDNIVVFMNKV 177 Score = 38.3 bits (85), Expect = 0.006 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 53 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWV 223 ++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104 Query: 224 LDKLKAEREVDH 259 L+ A+R H Sbjct: 105 LEYETAKRHYAH 116 >D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 496 Score = 67.7 bits (158), Expect = 8e-12 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152 Query: 429 KNGQTREHALLAFTLGV--KQLIVGVNKM 509 QTREH LLA +GV ++V +NK+ Sbjct: 153 ---QTREHLLLARQVGVPLDNIVVFMNKV 178 Score = 38.3 bits (85), Expect = 0.006 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 53 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWV 223 ++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105 Query: 224 LDKLKAEREVDH 259 L+ A+R H Sbjct: 106 LEYETAKRHYAH 117 >AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 1 protein. Length = 496 Score = 67.7 bits (158), Expect = 8e-12 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152 Query: 429 KNGQTREHALLAFTLGV--KQLIVGVNKM 509 QTREH LLA +GV ++V +NK+ Sbjct: 153 ---QTREHLLLARQVGVPLDNIVVFMNKV 178 Score = 38.3 bits (85), Expect = 0.006 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 53 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWV 223 ++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105 Query: 224 LDKLKAEREVDH 259 L+ A+R H Sbjct: 106 LEYETAKRHYAH 117 >Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical protein C47B2.7b protein. Length = 500 Score = 38.7 bits (86), Expect = 0.004 Identities = 25/86 (29%), Positives = 43/86 (50%) Frame = +3 Query: 303 VTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 482 + +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126 Query: 483 QLIVGVNKMIPLNHHTVSPDLRKSRR 560 ++I+ +NK +S +K R+ Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152 Score = 28.7 bits (61), Expect = 4.8 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 68 INIVVIGHVDSGKSTTT 118 +N+ ++GHVDSGK+T T Sbjct: 14 LNLGILGHVDSGKTTLT 30 >Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical protein F46B6.6a protein. Length = 702 Score = 38.7 bits (86), Expect = 0.004 Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = +3 Query: 255 ITIDIALWKFETSK-YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 431 IT I + E +K VT +D PGH F G AD VL+VAA G E Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE----- 243 Query: 432 NGQTREHALLAFTLGVKQLIVGVNKM 509 QT + A V QL+V VNK+ Sbjct: 244 --QTAQSIKFAKDANV-QLVVAVNKI 266 >AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical protein Y119D3B.14 protein. Length = 689 Score = 34.3 bits (75), Expect = 0.096 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI 148 NI VI HVD+GK+T T L+Y G I Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52 Score = 28.3 bits (60), Expect = 6.3 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 R IT+ A + + + +ID PGH DF + D V+++ G Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126 >L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical protein ZK1236.1 protein. Length = 645 Score = 33.9 bits (74), Expect = 0.13 Identities = 26/87 (29%), Positives = 38/87 (43%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428 R IT+ Y + +ID PGH DF + + D +L+VAA G Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138 Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509 QT + LAF + Q+I +NK+ Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKI 164 Score = 32.3 bits (70), Expect = 0.39 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = +2 Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 187 N ++ HVD GKST L+ CG + K+ ++K + E + Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85 >AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical protein Y54G2A.28 protein. Length = 366 Score = 33.5 bits (73), Expect = 0.17 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -1 Query: 505 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 377 LF PT+SC+ + AS S P + PA N VP AT+S + Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54 >Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical protein F29C12.4 protein. Length = 750 Score = 33.1 bits (72), Expect = 0.22 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGID 151 NI + H+DSGK+T T ++Y G ID Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72 Score = 29.5 bits (63), Expect = 2.7 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 R ITI A + + IID PGH DF + D AVL++ G G Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147 >Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein F25H5.4 protein. Length = 852 Score = 32.7 bits (71), Expect = 0.29 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142 M +++ N+ VI HVD GKST T L+ K G Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44 Score = 30.7 bits (66), Expect = 1.2 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = +3 Query: 258 TIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 T+++ K + + + + +ID+PGH DF + D A+++V +G Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146 >M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor protein. Length = 852 Score = 32.7 bits (71), Expect = 0.29 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142 M +++ N+ VI HVD GKST T L+ K G Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44 Score = 31.1 bits (67), Expect = 0.90 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = +3 Query: 258 TIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 T+++ K + + + + +ID+PGH DF + D A+++V +G Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146 >U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor protein 1 protein. Length = 974 Score = 32.3 bits (70), Expect = 0.39 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 243 SVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 S++ + I + Y + IID PGH +F M AD V++V A G Sbjct: 183 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237 >M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. Length = 849 Score = 32.3 bits (70), Expect = 0.39 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 243 SVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407 S++ + I + Y + IID PGH +F M AD V++V A G Sbjct: 58 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112 >AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical protein Y39G10AR.8 protein. Length = 469 Score = 31.9 bits (69), Expect = 0.51 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = +3 Query: 300 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 479 +V+ +D PGH + M+ G + D A L+VA QT EH + + Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181 Query: 480 KQLIVGVNKM 509 L++ NK+ Sbjct: 182 NHLMILQNKV 191 >L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding protein protein. Length = 593 Score = 31.1 bits (67), Expect = 0.90 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 23 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 133 ++IRD P K+ + V+G+VD+GKST G L + Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162 >AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis gtp-binding proteinprotein 1 protein. Length = 613 Score = 31.1 bits (67), Expect = 0.90 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 23 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 133 ++IRD P K+ + V+G+VD+GKST G L + Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162 >Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical protein F57F5.5 protein. Length = 707 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 125 LIYKCGGIDKRTIEKFEKEAQETGKGSF 208 +++KC G +E+ KE QETG G F Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243 >Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical protein F57F5.5 protein. Length = 707 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 125 LIYKCGGIDKRTIEKFEKEAQETGKGSF 208 +++KC G +E+ KE QETG G F Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243 >Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical protein F54D5.5b protein. Length = 492 Score = 29.9 bits (64), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 149 DKRTIEKFEKEAQETGKGSFKYAWVLDKLKAERE 250 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305 >Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical protein F54D5.5a protein. Length = 427 Score = 29.9 bits (64), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 149 DKRTIEKFEKEAQETGKGSFKYAWVLDKLKAERE 250 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240 >U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C protein. Length = 707 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 125 LIYKCGGIDKRTIEKFEKEAQETGKGSF 208 +++KC G +E+ KE QETG G F Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243 >DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic translation initiationfactor eIF5B protein. Length = 1074 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 309 IIDAPGHXDFIKNMITGTSQADCAVLIV 392 IID PGH F G+S D A+L+V Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580 >AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical protein H30A04.1b protein. Length = 810 Score = 29.5 bits (63), Expect = 2.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 567 PHTSRRLATTQLLSLSCPFLD 629 PH SR T L+ SCPFLD Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178 >AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical protein H30A04.1a protein. Length = 808 Score = 29.5 bits (63), Expect = 2.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 567 PHTSRRLATTQLLSLSCPFLD 629 PH SR T L+ SCPFLD Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178 >AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. Length = 810 Score = 29.5 bits (63), Expect = 2.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 567 PHTSRRLATTQLLSLSCPFLD 629 PH SR T L+ SCPFLD Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178 >AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. Length = 808 Score = 29.5 bits (63), Expect = 2.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 567 PHTSRRLATTQLLSLSCPFLD 629 PH SR T L+ SCPFLD Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178 >Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical protein C47B2.7a protein. Length = 459 Score = 28.7 bits (61), Expect = 4.8 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 68 INIVVIGHVDSGKSTTT 118 +N+ ++GHVDSGK+T T Sbjct: 14 LNLGILGHVDSGKTTLT 30 >Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical protein K10C3.5b protein. Length = 705 Score = 28.3 bits (60), Expect = 6.3 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +3 Query: 303 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 392 + +ID+PGH DF + + +D A+L++ Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114 >Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein K10C3.5a protein. Length = 894 Score = 28.3 bits (60), Expect = 6.3 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +3 Query: 303 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 392 + +ID+PGH DF + + +D A+L++ Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114 >U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical protein F55A4.5 protein. Length = 705 Score = 28.3 bits (60), Expect = 6.3 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 13/118 (11%) Frame = -3 Query: 524 VVQWNHFVYSYDELFDTEGESEQGMLTGLTVLRDT-SFEFTGTG---SYDEHSAISLRGS 357 + ++N + Y+ L D G + + + T VL + +FE +GT + + +L+G+ Sbjct: 86 IARFNKLRHVYN-LQDESGPAHKKLFTVKLVLTEAETFEGSGTSIKRAQQASAEAALKGT 144 Query: 356 CDHVLDEISVSRSINDG--------NIVLA-SFELPESNIDCDPPHAQPLVCPIPKHI 210 + E + IND N+ +++P + I C+PP CP+P+HI Sbjct: 145 KLPLPTEKPTKKRINDTTKPHRVLQNVCRTLQYQMP-NYISCNPPVYPDPGCPLPEHI 201 >AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical protein Y54G2A.26b protein. Length = 549 Score = 27.9 bits (59), Expect = 8.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 485 AHRRSKQNDSTEPPYSEPRFEEIKKEV 565 AHRR K ND + P YS E++ V Sbjct: 124 AHRRKKHNDLSSPRYSSNSNEDVDGSV 150 >AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical protein Y54G2A.26a protein. Length = 611 Score = 27.9 bits (59), Expect = 8.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 485 AHRRSKQNDSTEPPYSEPRFEEIKKEV 565 AHRR K ND + P YS E++ V Sbjct: 186 AHRRKKHNDLSSPRYSSNSNEDVDGSV 212 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,034,015 Number of Sequences: 27780 Number of extensions: 393846 Number of successful extensions: 1298 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 1180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1288 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1830096852 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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