Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021958
(766 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 152 2e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 152 2e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 152 2e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 152 2e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 99 3e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 94 1e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 71 1e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 68 8e-12
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 39 0.004
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 39 0.004
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 37 0.013
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 37 0.013
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.022
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 36 0.039
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.12
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 34 0.12
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 34 0.12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 34 0.12
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.28
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.28
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.64
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 30 1.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 2.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 2.6
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 2.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.4
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 29 4.5
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 29 4.5
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.5
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.9
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.9
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.9
At5g64600.1 68418.m08118 expressed protein similar to axi 1 [Nic... 28 7.8
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.8
At1g76530.1 68414.m08906 auxin efflux carrier family protein con... 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 152 bits (369), Expect = 2e-37
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET+KYY T+IDAPGH DFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 127 bits (307), Expect = 7e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK--- 212
Query: 689 VERKEGKADGKCLIEALDAILPPARP 766
G L+EALD I P RP
Sbjct: 213 ---------GPTLLEALDQINEPKRP 229
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (369), Expect = 2e-37
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET+KYY T+IDAPGH DFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 127 bits (307), Expect = 7e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK--- 212
Query: 689 VERKEGKADGKCLIEALDAILPPARP 766
G L+EALD I P RP
Sbjct: 213 ---------GPTLLEALDQINEPKRP 229
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (369), Expect = 2e-37
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET+KYY T+IDAPGH DFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 127 bits (307), Expect = 7e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK--- 212
Query: 689 VERKEGKADGKCLIEALDAILPPARP 766
G L+EALD I P RP
Sbjct: 213 ---------GPTLLEALDQINEPKRP 229
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (369), Expect = 2e-37
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITIDIALWKFET+KYY T+IDAPGH DFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
K+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 127 bits (307), Expect = 7e-30
Identities = 60/68 (88%), Positives = 61/68 (89%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 227 DKLKAERE 250
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 688
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK--- 212
Query: 689 VERKEGKADGKCLIEALDAILPPARP 766
G L+EALD I P RP
Sbjct: 213 ---------GPTLLEALDQINEPKRP 229
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99.1 bits (236), Expect = 3e-21
Identities = 48/94 (51%), Positives = 62/94 (65%)
Frame = +3
Query: 228 TN*RLSVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
TN ++ T+++ FET TI+DAPGH ++ NMI+G SQAD VL+++A G
Sbjct: 156 TNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
Query: 408 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 509
EFE G + GQTREH LA TLGV +LIV VNKM
Sbjct: 216 EFETGYERGGQTREHVQLAKTLGVSKLIVVVNKM 249
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +2
Query: 56 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKL 235
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 236 KAER 247
+ ER
Sbjct: 158 EEER 161
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 497 SKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--M 667
+K +D T +S+ R++EI++++ ++K GYN V F+PISG G NM + +
Sbjct: 247 NKMDDPTVN-WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEIC 305
Query: 668 PWFKG 682
PW+ G
Sbjct: 306 PWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R IT+ +A+ F + +++V ++D+PGH DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 301 RGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFD 360
Query: 429 K-NGQTREHALLAFTLGVKQLIVGVNKM 509
GQTREHA + GV+Q+IV +NKM
Sbjct: 361 NLKGQTREHARVLRGFGVEQVIVAINKM 388
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +2
Query: 62 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQETGKGSFKYAWVLDKLKA 241
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 242 ERE 250
ERE
Sbjct: 298 ERE 300
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 527 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWQVERKE 703
YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS W
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY----- 445
Query: 704 GKADGKCLIEALDAILPPAR 763
G CL++A+D++ P R
Sbjct: 446 ---QGPCLLDAVDSVKSPDR 462
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/86 (41%), Positives = 52/86 (60%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 126 RGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP---- 181
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNK 506
QT+EH LLA +GV ++V +NK
Sbjct: 182 ---QTKEHILLAKQVGVPDMVVFLNK 204
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 44 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 178
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 428
R ITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 114 RGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP---- 169
Query: 429 KNGQTREHALLAFTLGVKQLIVGVNKM 509
QT+EH LLA +GV L+ +NK+
Sbjct: 170 ---QTKEHILLARQVGVPSLVCFLNKV 193
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 53 KEKTHINIVVIGHVDSGKSTTT 118
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 240 LSVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
+S++ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 240 LSVRWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
+S++ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 288 TSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 467
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 468 TLGVKQLIVGVNKMIPLN 521
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 288 TSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 467
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 468 TLGVKQLIVGVNKMIPLN 521
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +3
Query: 282 FETSKY----YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 449
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 450 HALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKY 566
H + +K +I+ NK I L V+ + ++ +K+
Sbjct: 166 HLAAVEIMQLKHIIILQNK-IDLIQENVAINQHEAIQKF 203
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 300 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 479
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 480 KQLIVGVNKM 509
K +I+ NK+
Sbjct: 174 KDIIIIQNKI 183
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 285 ETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 35 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 154
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGG 145
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 255 ITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 434
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 435 GQTREH 452
Q R +
Sbjct: 179 RQMRRY 184
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI 148
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 255 ITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 434
ITI A Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 119 ITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 178
Query: 435 GQTREH 452
Q R +
Sbjct: 179 RQMRRY 184
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI 148
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 303 VTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 59 KTHINIVVIGHVDSGKSTTTGHLIYKCG 142
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 249 RWITIDIALWKFETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
R ITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 145 RGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 282 FETSKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 407
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 169
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 291 SKYYVTIIDAPGHXDFIKNMITGTSQADCAVLIV 392
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCG 142
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 309 IIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 309 IIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 309 IIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 303 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 392
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 506 NDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 625
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 506 NDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 625
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 647 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 745
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 583 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 684
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 530 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 619
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +3
Query: 555 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 722
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 723 ASLKLSMP 746
A KLSMP
Sbjct: 187 A--KLSMP 192
>At5g64600.1 68418.m08118 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 522
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 473 RCQTAHRRSKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG--DNM 646
R T+H + K +STE E KEV ++K +GY+ + V ++ +G D +
Sbjct: 313 RESTSHWKIKSINSTEQR-EEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRL 371
Query: 647 LEPSTKMP 670
E ++ P
Sbjct: 372 SELKSRFP 379
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 536 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 646
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g76530.1 68414.m08906 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 415
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 458 ARFHPRCQTAHRRSKQNDSTEPPYSEPRFEEIKKEVSSYIKKIG----YNPAAVAFV 616
+ + C+ SK+ + E + R+EE+K+ V S KK+ + PA +A +
Sbjct: 201 SNYDDSCKVQLISSKEEEKEEDNHQVGRWEEVKQRVVSLSKKVNLGSIFAPATIAAI 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,266,947
Number of Sequences: 28952
Number of extensions: 376652
Number of successful extensions: 1224
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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