BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021957 (614 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A6PQ47 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4 UniRef50_A1L1Q3 Cluster: Zgc:158237; n=3; Danio rerio|Rep: Zgc:1... 32 9.4 UniRef50_A5GQA8 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 32 9.4 >UniRef50_A6PQ47 Cluster: Putative uncharacterized protein; n=1; Victivallis vadensis ATCC BAA-548|Rep: Putative uncharacterized protein - Victivallis vadensis ATCC BAA-548 Length = 99 Score = 33.1 bits (72), Expect = 5.4 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 476 IFATSSNGFRRGVTHVHLSTLEQRHANRRVCVAVLVSRWTAY 601 +F S G +G THVH T RH +R V + V + Y Sbjct: 32 LFWESRRGIPKGTTHVHARTCRNRHRHRCVLLKVFTGESSKY 73 >UniRef50_A1L1Q3 Cluster: Zgc:158237; n=3; Danio rerio|Rep: Zgc:158237 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 531 Score = 32.3 bits (70), Expect = 9.4 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +1 Query: 454 VPDATRSYFCHQQQRFPSRG-DACAPEYPG-TASCKSAGVCSS 576 VPD R+ F QQ+ SRG D P PG ++SC S C S Sbjct: 324 VPDGRRAPFPPQQRSSSSRGIDTQTPSVPGRSSSCSSLSPCPS 366 >UniRef50_A5GQA8 Cluster: TRNA nucleotidyltransferase/poly(A) polymerase; n=1; Synechococcus sp. RCC307|Rep: TRNA nucleotidyltransferase/poly(A) polymerase - Synechococcus sp. (strain RCC307) Length = 410 Score = 32.3 bits (70), Expect = 9.4 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 370 WNRSLEHNYTREILRLMTTL-SVPSTRTLVPDATRSYFCHQQQRFPSRG 513 W +++ N++ E L+L+ L VP L+ A R H+QQ+ SRG Sbjct: 262 WGHAIDPNWSAEELKLVGLLWLVPHQNNLLAIAKRLQLAHRQQQLLSRG 310 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 595,589,865 Number of Sequences: 1657284 Number of extensions: 11510314 Number of successful extensions: 26793 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 25919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26775 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 44392209541 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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