Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021957
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069502-1|AAL39647.1| 1066|Drosophila melanogaster LD22513p pro...    31   1.6  
AE013599-1824|AAM70986.1|  934|Drosophila melanogaster CG8233-PC...    31   1.6  
AE013599-1823|AAM70985.2| 1066|Drosophila melanogaster CG8233-PB...    31   1.6  
AE013599-1822|AAF58295.3| 1001|Drosophila melanogaster CG8233-PA...    31   1.6  
BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p pro...    29   6.6  
BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p pro...    29   6.6  
AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA...    29   6.6  
BT022232-1|AAY54648.1|  363|Drosophila melanogaster IP12466p pro...    28   8.7  
AE014296-2951|AAF49310.2|  486|Drosophila melanogaster CG7460-PB...    28   8.7  

>AY069502-1|AAL39647.1| 1066|Drosophila melanogaster LD22513p
           protein.
          Length = 1066

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 607 LFVRRPSADQHCYTHPPICMTLFQGTQVHMRHPSTETVAAGGKNNCA 467
           + VR P     C+T+PP    L +  Q H+  P  E VA    N CA
Sbjct: 157 ILVRHPPQCPSCHTYPPQHEELSEIQQAHV-PPYDEVVAKEAMNECA 202


>AE013599-1824|AAM70986.1|  934|Drosophila melanogaster CG8233-PC,
           isoform C protein.
          Length = 934

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 607 LFVRRPSADQHCYTHPPICMTLFQGTQVHMRHPSTETVAAGGKNNCA 467
           + VR P     C+T+PP    L +  Q H+  P  E VA    N CA
Sbjct: 25  ILVRHPPQCPSCHTYPPQHEELSEIQQAHV-PPYDEVVAKEAMNECA 70


>AE013599-1823|AAM70985.2| 1066|Drosophila melanogaster CG8233-PB,
           isoform B protein.
          Length = 1066

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 607 LFVRRPSADQHCYTHPPICMTLFQGTQVHMRHPSTETVAAGGKNNCA 467
           + VR P     C+T+PP    L +  Q H+  P  E VA    N CA
Sbjct: 157 ILVRHPPQCPSCHTYPPQHEELSEIQQAHV-PPYDEVVAKEAMNECA 202


>AE013599-1822|AAF58295.3| 1001|Drosophila melanogaster CG8233-PA,
           isoform A protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 607 LFVRRPSADQHCYTHPPICMTLFQGTQVHMRHPSTETVAAGGKNNCA 467
           + VR P     C+T+PP    L +  Q H+  P  E VA    N CA
Sbjct: 92  ILVRHPPQCPSCHTYPPQHEELSEIQQAHV-PPYDEVVAKEAMNECA 137


>BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p
           protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 412 SISHEYNYVPKNGSTELCQETSC 344
           S+SHEY+YV   G   L Q +SC
Sbjct: 90  SVSHEYHYVSPVGEDNLLQCSSC 112


>BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p
           protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 412 SISHEYNYVPKNGSTELCQETSC 344
           S+SHEY+YV   G   L Q +SC
Sbjct: 213 SVSHEYHYVSPVGEDNLLQCSSC 235


>AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA
           protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 412 SISHEYNYVPKNGSTELCQETSC 344
           S+SHEY+YV   G   L Q +SC
Sbjct: 213 SVSHEYHYVSPVGEDNLLQCSSC 235


>BT022232-1|AAY54648.1|  363|Drosophila melanogaster IP12466p
           protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +3

Query: 273 DLGVCCNYYRRNRAVCRKSKTPTQQDVSWHNSVEPFFGT*LYS*DIEINDHFICTVYSHS 452
           DLG+  ++ R NR +          +++W  + E       ++ ++   DH ICTV    
Sbjct: 104 DLGILKDHVRLNRRIA---------EINWKGADE--LTVRCWNGEVITADHVICTVSLGV 152

Query: 453 CTGCHAQLFLP--PAATV-SVEG*RMCT 527
               H +LF+P  PAA V ++EG ++ T
Sbjct: 153 LKEQHPKLFVPALPAAKVRAIEGLKLGT 180


>AE014296-2951|AAF49310.2|  486|Drosophila melanogaster CG7460-PB
           protein.
          Length = 486

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +3

Query: 273 DLGVCCNYYRRNRAVCRKSKTPTQQDVSWHNSVEPFFGT*LYS*DIEINDHFICTVYSHS 452
           DLG+  ++ R NR +          +++W  + E       ++ ++   DH ICTV    
Sbjct: 227 DLGILKDHVRLNRRIA---------EINWKGADE--LTVRCWNGEVITADHVICTVSLGV 275

Query: 453 CTGCHAQLFLP--PAATV-SVEG*RMCT 527
               H +LF+P  PAA V ++EG ++ T
Sbjct: 276 LKEQHPKLFVPALPAAKVRAIEGLKLGT 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,369,060
Number of Sequences: 53049
Number of extensions: 560004
Number of successful extensions: 1696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)