Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021957
         (614 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g06840.1 68416.m00811 expressed protein                             28   4.3  
At5g40540.1 68418.m04920 protein kinase, putative similar to pro...    28   5.7  

>At3g06840.1 68416.m00811 expressed protein
          Length = 187

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 245 MRMIAPVFSTSTSRHFSKARGFIPLLILSTRSEVV*KKQRE 123
           M  I+P+FS S S+HFS   GF P L      E   K +RE
Sbjct: 1   MSNISPIFSISNSQHFSD-YGFDPQLHYFQVMEEARKHKRE 40


>At5g40540.1 68418.m04920 protein kinase, putative similar to
           protein kinase ATN1 [Arabidopsis thaliana]
           gi|1054633|emb|CAA63387
          Length = 353

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +1

Query: 391 NYTREILRLMTTLSVPSTRTLVPDATRSYFCHQQQRFPSRGDACAPEYPGTAS 549
           N+T  I  L+  LS  S+  LVP A +  F  +    P       PE PGT S
Sbjct: 278 NFTEIIQMLLRCLSTISSTELVPPAIKRVFSSENTVLP-------PESPGTCS 323


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,905,485
Number of Sequences: 28952
Number of extensions: 253868
Number of successful extensions: 582
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)