Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021955
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ...    31   1.0  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.0  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.0  
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ...    31   1.0  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    31   1.0  

>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
           protein F33H12.6 protein.
          Length = 1360

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677
           G+   LQDR +NY    +H     +SS AR F + I+  N     A  G
Sbjct: 56  GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 103


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677
           G+   LQDR +NY    +H     +SS AR F + I+  N     A  G
Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677
           G+   LQDR +NY    +H     +SS AR F + I+  N     A  G
Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209


>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
           protein Y46B2A.2 protein.
          Length = 1365

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677
           G+   LQDR +NY    +H     +SS AR F + I+  N     A  G
Sbjct: 72  GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 119


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677
           G+   LQDR +NY    +H     +SS AR F + I+  N     A  G
Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,040,403
Number of Sequences: 27780
Number of extensions: 203664
Number of successful extensions: 561
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)