BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021955 (681 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 31 1.0 AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 31 1.0 AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 31 1.0 AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 31 1.0 AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 31 1.0 >AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical protein F33H12.6 protein. Length = 1360 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677 G+ LQDR +NY +H +SS AR F + I+ N A G Sbjct: 56 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 103 >AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical protein ZK250.9 protein. Length = 1466 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677 G+ LQDR +NY +H +SS AR F + I+ N A G Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209 >AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical protein Y16E11A.2 protein. Length = 1466 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677 G+ LQDR +NY +H +SS AR F + I+ N A G Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209 >AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical protein Y46B2A.2 protein. Length = 1365 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677 G+ LQDR +NY +H +SS AR F + I+ N A G Sbjct: 72 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 119 >AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical protein F59H6.5 protein. Length = 1486 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 531 GIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRCIKTLNDLLKQAKAG 677 G+ LQDR +NY +H +SS AR F + I+ N A G Sbjct: 162 GLTTTLQDRFSNYPDELRHLL-LDDSSHARNFQKNIRQFNSSFAMASMG 209 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,040,403 Number of Sequences: 27780 Number of extensions: 203664 Number of successful extensions: 561 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 560 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1550199966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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