Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021954
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    26   1.4  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   2.5  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    25   2.5  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   5.8  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 426 DCVHRTAVGTASRSGHGDLLAGQLP 500
           D +  T VGT + SG+G   AG LP
Sbjct: 65  DNISATVVGTHNLSGNGRSAAGNLP 89


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 131 MPYTYIQQVPGKQIRTKLASAFNYWLKISEEK 226
           +P   + +VP   ++   A+  NY +KIS+ K
Sbjct: 361 LPKLLLMRVPNDLLKELAANKINYGIKISKSK 392


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 708 PRSNSCSRCTPSSTGCSNRRG 646
           P++   S C  +STG  NRRG
Sbjct: 71  PKTECMSECILNSTGIYNRRG 91


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +1

Query: 622 PCWGCISRSATITATCR*GSTPRTRVTARTSRMGSSASP 738
           PCW C   S     T R    PRTR +       + +SP
Sbjct: 19  PCWDCTVWSMASNRTVR---CPRTRRSEAVMTRSTPSSP 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,897
Number of Sequences: 2352
Number of extensions: 18568
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)