Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021954
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase (... 42 3e-04
At3g20160.1 68416.m02556 geranylgeranyl pyrophosphate synthase, ... 42 6e-04
At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase, ... 38 0.007
At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase, ... 38 0.007
At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase, ... 37 0.017
At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase (... 36 0.022
At2g18640.1 68415.m02171 geranylgeranyl pyrophosphate synthase, ... 36 0.022
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 36 0.029
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 36 0.029
At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase, ... 34 0.088
At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1, mi... 33 0.15
At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase (... 33 0.15
At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase, ... 33 0.20
At4g38460.1 68417.m05434 geranylgeranyl pyrophosphate synthase, ... 32 0.36
At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FP... 32 0.36
At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FP... 32 0.36
At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative ... 32 0.36
At1g64210.1 68414.m07274 leucine-rich repeat transmembrane prote... 30 1.9
At1g02330.1 68414.m00178 expressed protein contains similarity t... 30 1.9
At3g47610.1 68416.m05183 expressed protein 29 2.5
At2g23760.2 68415.m02838 BEL1-like homeobox 4 protein (BLH4) 28 5.8
At2g23760.1 68415.m02837 BEL1-like homeobox 4 protein (BLH4) 28 5.8
At5g45050.2 68418.m05524 disease resistance protein-related simi... 28 7.7
At5g45050.1 68418.m05523 disease resistance protein-related simi... 28 7.7
At4g23740.1 68417.m03415 leucine-rich repeat transmembrane prote... 28 7.7
At2g33510.1 68415.m04108 expressed protein 28 7.7
>At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase
(GGPS6) / GGPP synthetase / farnesyltranstransferase
identical to gi:2578821; similar to geranyl geranyl
pyrophosphate synthase GI:2578822 from [Arabidopsis
thaliana]
Length = 336
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTL 402
+H ASL++DD+ D+ LRRG P H ++G ++I A+N +A+++TL
Sbjct: 111 IHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTL 161
>At3g20160.1 68416.m02556 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:2578821; similar to geranyl geranyl pyrophosphate
synthase GB:BAA23157 [Arabidopsis thaliana]
Length = 344
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKT 399
LH +SL++DD+ DN LRRG P H ++G + I A+ + +A++KT
Sbjct: 122 LHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKT 171
>At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|Q43133
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Sinapis alba};
contains Pfam profile PF00348: Polyprenyl synthetase
Length = 360
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H +SL+ DD+ DN+ LRRG P H +YG + A + + +A E
Sbjct: 137 IHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFE 184
>At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|P34802
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Arabidopsis
thaliana}; contains Pfam profile PF00348: Polyprenyl
synthetase
Length = 360
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H +SL+ DD+ DN+ LRRG P H +YG + A + + +A E
Sbjct: 137 IHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFE 184
>At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:9294375; similar to geranylgeranyl pyrophosphate
synthetase GB:P34802 [Arabidopsis thaliana]
Length = 284
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE-KTLELGHPLAT 426
+H +SL+ DD+ DN+ LRRG P H ++G + A + + +A E T+ +A+
Sbjct: 61 IHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVAS 120
Query: 427 TVYTEQLLELHRGQG 471
++EL R G
Sbjct: 121 ERMIRAVVELARAIG 135
>At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase
(GGPS2) (GGPS5) / GGPP synthetase /
farnesyltranstransferase identical to GB:U44876;
sequence disagrees at N-Terminus, sequence submitted has
been confirmed from three electropherograms.
Length = 376
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H SL+ DD+ DN LRRG P H +YG I + + +A E
Sbjct: 156 IHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFE 203
>At2g18640.1 68415.m02171 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:1944371; contains GB:L22347
Length = 372
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLE 405
+H SL+ DD+ DN LRRG P H ++G + I + + +A E E
Sbjct: 152 IHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 256 LHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANY 372
+H ASL+ DD+ D S +RRG H ++G + A ++
Sbjct: 163 IHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDF 201
Score = 35.1 bits (77), Expect = 0.050
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 513 DEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTN----LSAVLGLYFQIRDDYCNLSMRE 680
DEY + KT L + + +FS + D T LGL FQI DD + +
Sbjct: 248 DEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQST 307
Query: 681 YTENKSYCEDLTDGKFSFPIIHAI 752
K DL G + P+I A+
Sbjct: 308 EQLGKPAGSDLAKGNLTAPVIFAL 331
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 256 LHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANY 372
+H ASL+ DD+ D S +RRG H ++G + A ++
Sbjct: 174 IHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDF 212
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 513 DEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTN----LSAVLGLYFQIRDDYCNLSMRE 680
D+Y + KT L + + +FS+ +S LGL FQ+ DD + +
Sbjct: 259 DDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQST 318
Query: 681 YTENKSYCEDLTDGKFSFPIIHAI 752
K DL G + P+I A+
Sbjct: 319 EQLGKPAANDLAKGNITAPVIFAL 342
>At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative identical to
gi:413730; similar to GB:P34802 from [Arabidopsis
thaliana] (Plant Physiol. 104 (4), 1469-1470 (1994))
Length = 360
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H +SL+ DD+ D++ LRRG P H ++G + A + + +A E
Sbjct: 137 IHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFE 184
>At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1,
mitochondrial (FPS1) / FPP synthetase 1 / farnesyl
diphosphate synthase 1 identical to SP|Q09152 Farnesyl
pyrophosphate synthetase 1, mitochondrial precursor (FPP
synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase
1) [Includes: Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis
thaliana}
Length = 384
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 591 ENKSDFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDLTDGKFSFPIIHAI 752
EN D N+ +G+YFQ++DDY + T K D+ D K S+ ++ A+
Sbjct: 254 ENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKAL 306
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 271 LLIDDIQDNSILRRGIP 321
L++DDI DNS+ RRG P
Sbjct: 132 LVLDDIMDNSVTRRGQP 148
>At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase
(GGPS1) / GGPP synthetase / farnesyltranstransferase
identical to GI:413730 to geranylgeranyl pyrophosphate
synthase, chloroplast precursor GB:P34802 from
[Arabidopsis thaliana] synonymous with
farnesyltranstransferase
Length = 371
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H SL+ DD+ DN LRRG P H ++G + A + + A E
Sbjct: 147 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFE 194
>At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730
to geranylgeranyl pyrophosphate synthase, chloroplast
precursor GB:P34802 from [Arabidopsis thaliana]
synonymous with farnesyltranstransferase
Length = 347
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H SL+ DD+ DN LRRG P H ++G + A + + A E
Sbjct: 126 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFE 173
>At4g38460.1 68417.m05434 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative 65% similar to
geranylgeranyl pyrophosphate synthase [GI:413730];
Length = 326
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 LHNASLLIDDI--QDNSILRRGIPVAHSIYGVASTINAANYAMIIALE 393
+H ASL+ DD+ D+ +RRG P H++YG I A + +A +
Sbjct: 119 VHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQ 166
>At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 247
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 591 ENKSDFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDLTDGKFSFPIIHAI 752
EN +D + +G+YFQ++DDY + T K D+ D K S+ ++ A+
Sbjct: 117 ENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKAL 169
>At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 342
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 591 ENKSDFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDLTDGKFSFPIIHAI 752
EN +D + +G+YFQ++DDY + T K D+ D K S+ ++ A+
Sbjct: 212 ENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKAL 264
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 271 LLIDDIQDNSILRRGIP 321
L++DDI DNS+ RRG P
Sbjct: 90 LVLDDIMDNSVTRRGQP 106
>At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative identical to GI:11322965 A.
thaliana geranyl diphosphate synthase
Length = 321
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 256 LHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVY 435
+H ASLL DD+ D++ RRG+ + + G ++ A ++ + A L + +
Sbjct: 72 IHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALL 131
Query: 436 TEQLLELHRGQGMEI 480
+ L G+ MEI
Sbjct: 132 ATAVEHLVTGETMEI 146
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 513 DEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAV----LGLYFQIRDDYCNLSMRE 680
D Y Q T KT L + + + + + ++ L+ LGL FQ+ DD + +
Sbjct: 157 DYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTS 216
Query: 681 YTENKSYCEDLTDGKFSFPIIHAI 752
+ K D+ G + PI+ A+
Sbjct: 217 ASLGKGSLSDIRHGVITAPILFAM 240
>At1g64210.1 68414.m07274 leucine-rich repeat transmembrane protein
kinase, putative contains 1 predicted transmembrane
domain; similar to receptor-like protein kinase
(GI:4008006) [Arabidopsis thaliana]; similar to
receptor-like kinase RHG1 (GI:21239382) [Glycine max];
similar to receptor-like protein kinase 3 (GI:13506810)
[Lycopersicon esculentum]
Length = 587
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 WPSIGNDCVHRTAVGTASRSGHGDLLAGQLP-VSLEDEYKQMTIKKTGGLFMLAIRLMQL 584
W + C T V T + +G +++ +LP V TI + L L++R
Sbjct: 43 WNQSSDVCHSWTGV-TCNENGDR-IVSVRLPAVGFNGLIPPFTISRLSSLKFLSLRKNHF 100
Query: 585 FSENKSDFTNLSAVLGLYFQ 644
+ SDFTNL ++ LY Q
Sbjct: 101 TGDFPSDFTNLKSLTHLYLQ 120
>At1g02330.1 68414.m00178 expressed protein contains similarity to
hepatocellular carcinoma-associated antigen 59
GI:7158847 from [Homo sapiens]
Length = 279
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3
Query: 489 GQLPVSLEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNL 668
G V L EYK I++T L ++ +L KS+F+ S+ YFQ DY
Sbjct: 158 GIAEVQLPIEYKLKNIEETEAAKKL-LQERRLMGRPKSEFSIPSSYSADYFQRGKDYAEK 216
Query: 669 SMREYTE 689
RE+ E
Sbjct: 217 LRREHPE 223
>At3g47610.1 68416.m05183 expressed protein
Length = 408
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 321 GSPLHLWCREHHQRCELCY-DHSPREDFGAWPSIGNDCVH 437
G L + R H R EL Y P+ D +WPS GND +H
Sbjct: 358 GLCLEITGRVQHDRSELKYLQADPKSDGKSWPS-GNDGLH 396
>At2g23760.2 68415.m02838 BEL1-like homeobox 4 protein (BLH4)
Length = 627
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +3
Query: 294 QQHLTARNTGSPLHLWCREHHQRCELCYDHS---PREDFGAWPSIGND-CVHRTAVGTAS 461
QQ+ N S LH+ HHQ +++ ++ WPS +D +R +GT
Sbjct: 88 QQNRHNNNNNSTLHMLLPNHHQGFAFTDENTMQPQQQQHFTWPSSSSDHHQNRDMIGTVH 147
Query: 462 RSGHGDL---LAGQLPVSLEDEYKQM 530
G L L+ L + +EY+ +
Sbjct: 148 VEGGKGLSLSLSSSLAAAKAEEYRSI 173
>At2g23760.1 68415.m02837 BEL1-like homeobox 4 protein (BLH4)
Length = 627
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +3
Query: 294 QQHLTARNTGSPLHLWCREHHQRCELCYDHS---PREDFGAWPSIGND-CVHRTAVGTAS 461
QQ+ N S LH+ HHQ +++ ++ WPS +D +R +GT
Sbjct: 88 QQNRHNNNNNSTLHMLLPNHHQGFAFTDENTMQPQQQQHFTWPSSSSDHHQNRDMIGTVH 147
Query: 462 RSGHGDL---LAGQLPVSLEDEYKQM 530
G L L+ L + +EY+ +
Sbjct: 148 VEGGKGLSLSLSSSLAAAKAEEYRSI 173
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 409 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCP 507
GHPLA +Y +L+ R MEI + +CP
Sbjct: 332 GHPLALNLYGRELMGKKRPPEMEIAFLKLKECP 364
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 409 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCP 507
GHPLA +Y +L+ R MEI + +CP
Sbjct: 332 GHPLALNLYGRELMGKKRPPEMEIAFLKLKECP 364
>At4g23740.1 68417.m03415 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase -
Arabidopsis thaliana RKL1, PID:g4008006
Length = 638
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 WPSIGNDCVHRTAVGTASRSGHGDLLAGQLP-VSLEDEYKQMTIKKTGGLFMLAIRLMQL 584
W C T V T ++ G ++A +LP V L + TI + L +L++R +
Sbjct: 48 WNETSQVCNIWTGV-TCNQDG-SRIIAVRLPGVGLNGQIPPNTISRLSALRVLSLRSNLI 105
Query: 585 FSENKSDFTNLSAVLGLYFQ 644
E DF L + LY Q
Sbjct: 106 SGEFPKDFVELKDLAFLYLQ 125
>At2g33510.1 68415.m04108 expressed protein
Length = 189
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 358 NAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRDNFQ 501
+++N M ++TLEL L+ + EQ L+L G+ I W++ +
Sbjct: 37 SSSNEHMTPISDRTLELNSHLSLPCHWEQCLDLKTGEIYYINWKNGMR 84
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,461,227
Number of Sequences: 28952
Number of extensions: 354366
Number of successful extensions: 1127
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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